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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g145227v5   uncharacterized protein 
 ath-u.5   EXT-like   hydroxyproline-rich glycoprotein family protein 
 gma-u.5   100806599   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 gma-u.5   100783739   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 sly-u.5   101264233   lyst-Interacting Protein5-like protein 
 osa-u.5   4340850   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 zma-u.5   100276474   uncharacterized LOC100276474 
 zma-u.5   103638323   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 vvi-u.5   100253708   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 ppo-u.5   7495316   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 
 mtr-u.5   11432014   protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 

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Top 50 coexpressed genes to CHLRE_03g145227v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g145227v5 (cre-r.1 coexpression data)

CoexMap"5721273"


creCHLRE_03g145227v5 | Entrez gene ID : 5721273    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre04144 [list] [network] Endocytosis (52 genes)
GO BP
GO:0032511 [list] [network] late endosome to vacuole transport via multivesicular body sorting pathway  (16 genes)  IEA  
GO CC
GO:0005771 [list] [network] multivesicular body  (8 genes)  IEA  
GO MF
Protein XP_042925542.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 4,  cyto 1  (predict for XP_042925542.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042925542.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g145227v5

.
ath-u.5
for
EXT-like

.
gma-u.5
for
100806599

.
gma-u.5
for
100783739

.
sly-u.5
for
101264233

.
osa-u.5
for
4340850

.
zma-u.5
for
100276474

.
zma-u.5
for
103638323

.
vvi-u.5
for
100253708

.
ppo-u.5
for
7495316

.
mtr-u.5
for
11432014

.


Ortholog ID: 7293
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol EXT-like LOC100783739 LOC100806599 LOC101264233 LOC4340850 LOC103638323 LOC100276474 LOC103866553 LOC100253708 LOC7495316 LOC11432014 LOC123150513 LOC123162070 LOC123407886 LOC107920911 LOC107916632 LOC106428317 CHLRE_03g145227v5 LOC8078238 LOC102599038 LOC102609750 LOC100841818 LOC107776769 LOC107766345
Function* hydroxyproline-rich glycoprotein family protein protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 lyst-Interacting Protein5-like protein protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 uncharacterized LOC100276474 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 uncharacterized protein protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma03250 Viral life cycle - HIV-1 2
zma03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra04141 Protein processing in endoplasmic reticulum 4
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 3
ppo04144 Endocytosis 2
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03250 Viral life cycle - HIV-1 2
hvu03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi03018 RNA degradation 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 6
cre03250 Viral life cycle - HIV-1 2
cre03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot00940 Phenylpropanoid biosynthesis 2
sot03250 Viral life cycle - HIV-1 2
sot03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03040 Spliceosome 2
cit03018 RNA degradation 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828782 100783739 100806599 101264233 4340850 103638323 100276474 103866553 100253708 7495316 11432014 123150513 123162070 123407886 107920911 107916632 106428317 5721273 8078238 102599038 102609750 100841818 107776769 107766345
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