ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106429509	DEK domain-containing chromatin-associated protein 3-like
bna-r.1	106348329	DEK domain-containing chromatin-associated protein 2-like
bna-r.1	106444881	DEK domain-containing chromatin-associated protein 3-like
bna-r.1	106428289	DEK domain-containing chromatin-associated protein 3
bra-r.6	103837477	protein DEK
bra-r.6	103845017	glutamic acid-rich protein
ath-u.5	AT3G48710	DEK domain-containing chromatin associated protein
ath-u.5	AT4G26630	DEK domain-containing chromatin associated protein
ath-u.5	AT5G55660	DEK domain-containing chromatin associated protein
ghi-r.1	107913441	protein DEK
ghi-r.1	121211080	protein DEK
cit-r.1	102609385	DEK domain-containing chromatin-associated protein 4
cit-r.1	102626375	DEK domain-containing chromatin-associated protein 1
gma-u.5	100779284	myb-like protein X
gma-u.5	100788998	protein DEK
gma-u.5	100785644	protein DEK
vvi-u.5	100249691	DEK domain-containing chromatin-associated protein 4
vvi-u.5	100245819	DEK domain-containing chromatin-associated protein 1
ppo-u.5	18095375	DEK domain-containing chromatin-associated protein 3
ppo-u.5	7471874	DEK domain-containing chromatin-associated protein 3
ppo-u.5	18103817	DEK domain-containing chromatin-associated protein 1
mtr-u.5	11435067	protein DEK
mtr-u.5	25489146	eukaryotic translation initiation factor 5B
mtr-u.5	11423522	myb-like protein X
sly-u.5	101250613	DEK domain-containing chromatin-associated protein 4
sly-u.5	101254244	DEK domain-containing chromatin-associated protein 4
sly-u.5	101264938	DEK domain-containing chromatin-associated protein 1
sot-r.1	102602937	protein DEK-like
sot-r.1	102584719	protein DEK
sot-r.1	102597735	protein DEK-like
nta-r.1	107831919	DEK domain-containing chromatin-associated protein 1-like
nta-r.1	107772508	DEK domain-containing chromatin-associated protein 4
nta-r.1	107776760	DEK domain-containing chromatin-associated protein 4
osa-u.5	4327229	DEK domain-containing chromatin-associated protein 1
osa-u.5	4333378	DEK domain-containing chromatin-associated protein 4
zma-u.5	103643665	protein DEK
zma-u.5	103650830	protein DEK-like
zma-u.5	100281533	uncharacterized LOC100281533
tae-r.2	123085826	titin homolog
tae-r.2	123080343	protein DEK
tae-r.2	123072057	protein DEK
hvu-r.1	123448460	eukaryotic translation initiation factor 5B-like
hvu-r.1	123445278	protein DEK-like
sbi-r.1	8079820	protein DEK
sbi-r.1	8064530	protein DEK
sbi-r.1	8062983	trichohyalin
bdi-r.1	100828576	protein DEK
bdi-r.1	100841401	claspin
cre-r.1	CHLRE_12g513150v5	uncharacterized protein

Top 50 coexpressed genes to 106429509 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106429509 (bna-r.1 coexpression data)

CoexMap"106429509"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:2000779 [list] [network] regulation of double-strand break repair	(23 genes)	IEA
GO:0006325 [list] [network] chromatin organization	(438 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

GO:0042393 [list] [network] histone binding	(165 genes)	IEA
GO:0003677 [list] [network] DNA binding	(6522 genes)	IEA

Protein

XP_048621718.1 [sequence] [blastp]
XP_048621719.1 [sequence] [blastp]
XP_048621720.1 [sequence] [blastp]
XP_048621722.1 [sequence] [blastp]
XP_048621723.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_048621718.1)
nucl 9	(predict for XP_048621719.1)
nucl 9	(predict for XP_048621720.1)
nucl 9	(predict for XP_048621722.1)
nucl 9	(predict for XP_048621723.1)

Subcellular
localization
TargetP

other 9	(predict for XP_048621718.1)
other 9	(predict for XP_048621719.1)
other 9	(predict for XP_048621720.1)
other 9	(predict for XP_048621722.1)
other 9	(predict for XP_048621723.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106429509	bna-r.1 for 106348329	bna-r.1 for 106444881	bna-r.1 for 106428289	bra-r.6 for 103837477	bra-r.6 for 103845017	ath-u.5 for AT3G48710	ath-u.5 for AT4G26630	ath-u.5 for AT5G55660	ghi-r.1 for 107913441	ghi-r.1 for 121211080	cit-r.1 for 102609385	cit-r.1 for 102626375	gma-u.5 for 100779284	gma-u.5 for 100788998	gma-u.5 for 100785644	vvi-u.5 for 100249691	vvi-u.5 for 100245819	ppo-u.5 for 18095375	ppo-u.5 for 7471874	ppo-u.5 for 18103817	mtr-u.5 for 11435067	mtr-u.5 for 25489146	mtr-u.5 for 11423522	sly-u.5 for 101250613	sly-u.5 for 101254244	sly-u.5 for 101264938	sot-r.1 for 102602937	sot-r.1 for 102584719	sot-r.1 for 102597735	nta-r.1 for 107831919	nta-r.1 for 107772508	nta-r.1 for 107776760	osa-u.5 for 4327229	osa-u.5 for 4333378	zma-u.5 for 103643665	zma-u.5 for 103650830	zma-u.5 for 100281533	tae-r.2 for 123085826	tae-r.2 for 123080343	tae-r.2 for 123072057	hvu-r.1 for 123448460	hvu-r.1 for 123445278	sbi-r.1 for 8079820	sbi-r.1 for 8064530	sbi-r.1 for 8062983	bdi-r.1 for 100828576	bdi-r.1 for 100841401	cre-r.1 for CHLRE_12g513150v5

Ortholog

Ortholog ID: 1126

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

DEK domain-containing chromatin-associated protein 1

DEK domain-containing chromatin-associated protein 4-like

DEK domain-containing chromatin-associated protein 3

protein DEK

myb-like protein X

DEK domain-containing chromatin associated protein

protein DEK

DEK domain-containing chromatin-associated protein 4

DEK domain-containing chromatin-associated protein 1

myb-like protein X

protein DEK

DEK domain-containing protein

DEK domain-containing chromatin-associated protein 4

DEK domain-containing chromatin-associated protein 1

DEK domain-containing chromatin-associated protein 3

DEK domain-containing chromatin-associated protein 1

protein DEK

eukaryotic translation initiation factor 5B

myb-like protein X

DEK domain-containing chromatin-associated protein 4

DEK domain-containing chromatin-associated protein 1

DEK domain-containing chromatin-associated protein 1-like

protein DEK

protein DEK-like

RNA-binding protein 25-like

DEK domain-containing chromatin-associated protein 4

DEK domain-containing chromatin-associated protein 1

DEK domain-containing chromatin-associated protein 4

protein DEK

protein DEK-like

protein DEK

titin homolog

protein DEK

eukaryotic translation initiation factor 5B-like

protein DEK-like

protein DEK

trichohyalin

protein DEK

claspin

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	2
ath03420	Nucleotide excision repair	2
ath03430	Mismatch repair	2
ath03440	Homologous recombination	2
ath03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma03420	Nucleotide excision repair	3
gma03430	Mismatch repair	3
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr03030	DNA replication	2
mtr03420	Nucleotide excision repair	2
mtr00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03440	Homologous recombination	3
sly00240	Pyrimidine metabolism	2
sly01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00941	Flavonoid biosynthesis	2
sot04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03030	DNA replication	2
osa03410	Base excision repair	2
osa03420	Nucleotide excision repair	2
osa03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03430	Mismatch repair	3
zma03030	DNA replication	2
zma03410	Base excision repair	2
zma03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	2
tae03410	Base excision repair	2
tae03420	Nucleotide excision repair	2
tae03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

106406664

106389775

106361348

103837477

103851868

828770

835660

836474

107926306

107931147

102609385

102626375

100779284

100788998

100812080

100249691

100245819

7471874

18103817

18105862

11435067

25489146

11423522

101250613

101264938

101249339

102584719

102597735

102606219

107772508

107801416

107809369

4327229

4333378

103643665

103650830

103626062

123085826

123072057

123063153

123448460

123445278

8079820

8064530

8062983

100828576

100841401

5728511

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	3	2	3	3	3	3	3	2	3	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106429509 (bna-r.1 coexpression data)

Top 50 enrichment test to 106429509 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**