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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PUB17   plant U-box 17 
 gma-u.5   100811153   U-box domain-containing protein 17 
 gma-u.5   100797462   U-box domain-containing protein 17 
 gma-u.5   100783749   U-box domain-containing protein 17 
 vvi-u.5   100853483   U-box domain-containing protein 17 
 vvi-u.5   100253280   U-box domain-containing protein 17 
 ppo-u.5   7463812   U-box domain-containing protein 17 
 ppo-u.5   7476316   U-box domain-containing protein 17 
 mtr-u.5   11440815   U-box domain-containing protein 17 
 sly-u.5   101245319   U-box domain-containing protein 17 
 osa-u.5   4328818   U-box domain-containing protein 4-like 
 zma-u.5   103654776   U-box domain-containing protein 4 
 zma-u.5   100381946   uncharacterized LOC100381946 

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Top 50 coexpressed genes to PUB17 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PUB17 (ath-u.5 coexpression data)

CoexMap"106432793"


bnaLOC106432793 | Entrez gene ID : 106432793    
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 1 3 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (1065 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1079 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048634410.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 1,  cyto 1,  cysk 1,  nucl_plas 1  (predict for XP_048634410.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_048634410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
PUB17

.
gma-u.5
for
100811153

.
gma-u.5
for
100797462

.
gma-u.5
for
100783749

.
vvi-u.5
for
100853483

.
vvi-u.5
for
100253280

.
ppo-u.5
for
7463812

.
ppo-u.5
for
7476316

.
mtr-u.5
for
11440815

.
sly-u.5
for
101245319

.
osa-u.5
for
4328818

.
zma-u.5
for
103654776

.
zma-u.5
for
100381946

.


Ortholog ID: 5017
Species ath gma gma sly osa zma zma bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol PUB17 LOC100797462 LOC100783749 LOC101245319 LOC4328818 LOC103654776 LOC100381946 LOC103835278 LOC100253280 LOC100853483 LOC7476316 LOC7463812 LOC11440815 LOC123144503 LOC123137087 LOC123401887 LOC107901708 LOC107925284 LOC8073819 LOC102577784 LOC102625017 LOC100824705 LOC107830531 LOC107799374
Function* plant U-box 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 4-like U-box domain-containing protein 4 uncharacterized LOC100381946 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 4 ACRE 276-like protein U-box domain-containing protein 17 U-box domain-containing protein 4 U-box domain-containing protein 17-like U-box domain-containing protein 17
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839808 100797462 100783749 101245319 4328818 103654776 100381946 103835278 100253280 100853483 7476316 7463812 11440815 123144503 123137087 123401887 107901708 107925284 8073819 102577784 102625017 100824705 107830531 107799374
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