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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102625017   U-box domain-containing protein 17 
 ath-u.5   PUB17   plant U-box 17 
 bra-r.6   103835278   U-box domain-containing protein 17 
 bra-r.6   103840491   U-box domain-containing protein 17 
 ghi-r.1   107893838   U-box domain-containing protein 17 
 ghi-r.1   107901708   U-box domain-containing protein 17 
 bna-r.1   111208188   U-box domain-containing protein 17-like 
 gma-u.5   100811153   U-box domain-containing protein 17 
 gma-u.5   100797462   U-box domain-containing protein 17 
 gma-u.5   100783749   U-box domain-containing protein 17 
 vvi-u.5   100853483   U-box domain-containing protein 17 
 vvi-u.5   100253280   U-box domain-containing protein 17 
 ppo-u.5   7463812   U-box domain-containing protein 17 
 ppo-u.5   7476316   U-box domain-containing protein 17 
 mtr-u.5   11440815   U-box domain-containing protein 17 
 sly-u.5   101245319   U-box domain-containing protein 17 
 sot-r.1   102577784   ACRE 276-like protein 
 nta-r.1   107830531   U-box domain-containing protein 17-like 
 nta-r.1   107799374   U-box domain-containing protein 17 
 osa-u.5   4328818   U-box domain-containing protein 4-like 
 zma-u.5   103654776   U-box domain-containing protein 4 
 zma-u.5   100381946   uncharacterized LOC100381946 
 tae-r.2   123137087   U-box domain-containing protein 4 
 tae-r.2   123144503   U-box domain-containing protein 4 
 tae-r.2   123127397   U-box domain-containing protein 4 
 hvu-r.1   123401887   U-box domain-containing protein 4 
 sbi-r.1   8073819   U-box domain-containing protein 4 
 bdi-r.1   100824705   U-box domain-containing protein 4 

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Top 50 coexpressed genes to 102625017 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102625017 (cit-r.1 coexpression data)

CoexMap"102625017"


citLOC102625017 | Entrez gene ID : 102625017      
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 2 1 3 2 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (265 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2569 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (249 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006467604.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 2,  cyto 1  (predict for XP_006467604.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_006467604.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102625017
ath-u.5
for
PUB17
bra-r.6
for
103835278
bra-r.6
for
103840491
ghi-r.1
for
107893838
ghi-r.1
for
107901708
bna-r.1
for
111208188
gma-u.5
for
100811153
gma-u.5
for
100797462
gma-u.5
for
100783749
vvi-u.5
for
100853483
vvi-u.5
for
100253280
ppo-u.5
for
7463812
ppo-u.5
for
7476316
mtr-u.5
for
11440815
sly-u.5
for
101245319
sot-r.1
for
102577784
nta-r.1
for
107830531
nta-r.1
for
107799374
osa-u.5
for
4328818
zma-u.5
for
103654776
zma-u.5
for
100381946
tae-r.2
for
123137087
tae-r.2
for
123144503
tae-r.2
for
123127397
hvu-r.1
for
123401887
sbi-r.1
for
8073819
bdi-r.1
for
100824705


Ortholog ID: 5017
Species cit ath bra bra ghi ghi ghi bna gma gma gma vvi vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC102625017 PUB17 LOC103835278 LOC103840491 LOC107893838 LOC107901708 LOC107925284 LOC106361653 LOC100811153 LOC100797462 LOC100783749 LOC100853483 LOC100253280 LOC7463812 LOC7476316 LOC11440815 LOC101245319 LOC102577784 LOC107830531 LOC107799374 LOC4328818 LOC103654776 LOC100381946 LOC123137087 LOC123144503 LOC123127397 LOC123401887 LOC8073819 LOC100824705
Function* U-box domain-containing protein 17 plant U-box 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17-like U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 U-box domain-containing protein 17 ACRE 276-like protein U-box domain-containing protein 17-like U-box domain-containing protein 17 U-box domain-containing protein 4-like U-box domain-containing protein 4 uncharacterized LOC100381946 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4 U-box domain-containing protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03272 Virion - Hepatitis viruses 2
sot04144 Endocytosis 2
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00670 One carbon pool by folate 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102625017 839808 103835278 103840491 107893838 107901708 107925284 106361653 100811153 100797462 100783749 100853483 100253280 7463812 7476316 11440815 101245319 102577784 107830531 107799374 4328818 103654776 100381946 123137087 123144503 123127397 123401887 8073819 100824705
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