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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106434474   prolyl 4-hydroxylase 1 
 bna-r.1   106394497   prolyl 4-hydroxylase 1 
 bna-r.1   106381468   prolyl 4-hydroxylase 1 
 bra-r.6   103866693   prolyl 4-hydroxylase 1 
 bra-r.6   103866039   prolyl 4-hydroxylase 1 
 ath-u.5   AT-P4H-1   P4H isoform 1 
 ghi-r.1   107896948   prolyl 4-hydroxylase 1 
 ghi-r.1   121214658   prolyl 4-hydroxylase 1 
 ghi-r.1   107914681   prolyl 4-hydroxylase 1 
 cit-r.1   102628340   prolyl 4-hydroxylase 1 
 gma-u.5   100820384   prolyl 4-hydroxylase 1 
 gma-u.5   100794585   prolyl 4-hydroxylase subunit alpha-1-like 
 vvi-u.5   100241153   prolyl 4-hydroxylase 1 
 ppo-u.5   7489921   prolyl 4-hydroxylase 1 
 mtr-u.5   11440759   prolyl 4-hydroxylase 1 
 sly-u.5   101259696   prolyl 4-hydroxylase 1 
 sot-r.1   102603525   prolyl 4-hydroxylase 1 
 nta-r.1   107770127   prolyl 4-hydroxylase 1 
 nta-r.1   142167896   prolyl 4-hydroxylase 1-like 
 osa-u.5   4335530   prolyl 4-hydroxylase 1 
 zma-u.5   100273794   uncharacterized LOC100273794 
 tae-r.2   123053064   prolyl 4-hydroxylase 1 
 tae-r.2   123045230   prolyl 4-hydroxylase 1 
 tae-r.2   123188972   prolyl 4-hydroxylase 1 
 hvu-r.1   123426453   prolyl 4-hydroxylase 1 
 sbi-r.1   8085780   prolyl 4-hydroxylase 1 
 bdi-r.1   100843006   prolyl 4-hydroxylase 1 

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Top 50 coexpressed genes to 106434474 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106434474 (bna-r.1 coexpression data)

CoexMap"106434474"


bnaLOC106434474 | Entrez gene ID : 106434474    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00330 [list] [network] Arginine and proline metabolism (179 genes)
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (44 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1651 genes)  IEA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (44 genes)  IEA  
GO:0031418 [list] [network] L-ascorbic acid binding  (54 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (962 genes)  IEA  
Protein XP_013730802.2 [sequence] [blastp]
XP_022557902.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  chlo 2,  cyto 1,  nucl 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  nucl_plas 1,  golg_plas 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_013730802.2)
chlo 5,  vacu 2,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_022557902.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_013730802.2)
scret 9  (predict for XP_022557902.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106434474
bna-r.1
for
106394497
bna-r.1
for
106381468
bra-r.6
for
103866693
bra-r.6
for
103866039
ath-u.5
for
AT-P4H-1
ghi-r.1
for
107896948
ghi-r.1
for
121214658
ghi-r.1
for
107914681
cit-r.1
for
102628340
gma-u.5
for
100820384
gma-u.5
for
100794585
vvi-u.5
for
100241153
ppo-u.5
for
7489921
mtr-u.5
for
11440759
sly-u.5
for
101259696
sot-r.1
for
102603525
nta-r.1
for
107770127
nta-r.1
for
142167896
osa-u.5
for
4335530
zma-u.5
for
100273794
tae-r.2
for
123053064
tae-r.2
for
123045230
tae-r.2
for
123188972
hvu-r.1
for
123426453
sbi-r.1
for
8085780
bdi-r.1
for
100843006


Ortholog ID: 7550
Species bna bna bra bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC106394497 LOC106381468 LOC103866693 LOC103866039 AT-P4H-1 LOC107896948 LOC107908443 LOC107887177 LOC102628340 LOC100820384 LOC100794585 LOC100241153 LOC7489921 LOC11440759 LOC101259696 LOC102603525 LOC107770127 LOC142167896 LOC4335530 LOC100273794 LOC123053064 LOC123045230 LOC123188972 LOC123426453 LOC8085780 LOC100843006
Function* prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 P4H isoform 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase subunit alpha-1-like prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1-like prolyl 4-hydroxylase 1 uncharacterized LOC100273794 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03083 Polycomb repressive complex 4
bna04712 Circadian rhythm - plant 4
bna00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03083 Polycomb repressive complex 4
bna04712 Circadian rhythm - plant 4
bna00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 4
ghi00330 Arginine and proline metabolism 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00071 Fatty acid degradation 2
ppo00592 alpha-Linolenic acid metabolism 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00410 beta-Alanine metabolism 2
mtr01200 Carbon metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 2
zma00261 Monobactam biosynthesis 2
zma00270 Cysteine and methionine metabolism 2
zma00300 Lysine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
bdi04146 Peroxisome 2
bdi00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106394497 106381468 103866693 103866039 818910 107896948 107908443 107887177 102628340 100820384 100794585 100241153 7489921 11440759 101259696 102603525 107770127 142167896 4335530 100273794 123053064 123045230 123188972 123426453 8085780 100843006
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