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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106434518   pentatricopeptide repeat-containing protein At1g34160 
 bna-r.1   106436099   pentatricopeptide repeat-containing protein At1g34160 
 bra-r.6   103840021   pentatricopeptide repeat-containing protein At1g34160 
 ath-u.5   AT1G34160   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107962167   pentatricopeptide repeat-containing protein At1g34160 
 cit-r.1   102614912   pentatricopeptide repeat-containing protein At1g34160 
 gma-u.5   100818600   pentatricopeptide repeat-containing protein At1g34160 
 vvi-u.5   100259647   pentatricopeptide repeat-containing protein At1g34160 
 ppo-u.5   7492501   pentatricopeptide repeat-containing protein At1g34160 
 mtr-u.5   25479592   pentatricopeptide repeat-containing protein At1g34160 
 sly-u.5   101257765   pentatricopeptide repeat-containing protein At1g34160 
 sot-r.1   102588622   pentatricopeptide repeat-containing protein At1g34160 
 nta-r.1   107767459   pentatricopeptide repeat-containing protein At1g34160-like 
 nta-r.1   107793592   pentatricopeptide repeat-containing protein At1g34160-like 
 osa-u.5   4351952   pentatricopeptide repeat-containing protein OGR1, mitochondrial-like 
 zma-u.5   100383228   uncharacterized LOC100383228 
 hvu-r.1   123409008   pentatricopeptide repeat-containing protein OGR1, mitochondrial 
 sbi-r.1   8065517   pentatricopeptide repeat-containing protein OGR1, mitochondrial 
 bdi-r.1   100836231   pentatricopeptide repeat-containing protein OGR1, mitochondrial 

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Top 50 coexpressed genes to 106434518 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106434518 (bna-r.1 coexpression data)

CoexMap"106434518"


bnaLOC106434518 | Entrez gene ID : 106434518    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 2 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013730846.1 [sequence] [blastp]
XP_022568076.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_013730846.1)
chlo 5,  mito 3,  pero 2  (predict for XP_022568076.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_013730846.1)
chlo 7  (predict for XP_022568076.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106434518
bna-r.1
for
106436099
bra-r.6
for
103840021
ath-u.5
for
AT1G34160
ghi-r.1
for
107962167
cit-r.1
for
102614912
gma-u.5
for
100818600
vvi-u.5
for
100259647
ppo-u.5
for
7492501
mtr-u.5
for
25479592
sly-u.5
for
101257765
sot-r.1
for
102588622
nta-r.1
for
107767459
nta-r.1
for
107793592
osa-u.5
for
4351952
zma-u.5
for
100383228
hvu-r.1
for
123409008
sbi-r.1
for
8065517
bdi-r.1
for
100836231


Ortholog ID: 11786
Species bna bna bra ath ghi cit gma vvi ppo mtr sly sot nta nta osa zma hvu sbi bdi
Symbol LOC106434518 LOC106436099 LOC103840021 AT1G34160 LOC107962167 LOC102614912 LOC100818600 LOC100259647 LOC7492501 LOC25479592 LOC101257765 LOC102588622 LOC107767459 LOC107793592 LOC4351952 LOC100383228 LOC123409008 LOC8065517 LOC100836231
Function* pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160 pentatricopeptide repeat-containing protein At1g34160-like pentatricopeptide repeat-containing protein At1g34160-like pentatricopeptide repeat-containing protein OGR1, mitochondrial-like uncharacterized LOC100383228 pentatricopeptide repeat-containing protein OGR1, mitochondrial pentatricopeptide repeat-containing protein OGR1, mitochondrial pentatricopeptide repeat-containing protein OGR1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01232 Nucleotide metabolism 2
hvu00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106434518 106436099 103840021 840315 107962167 102614912 100818600 100259647 7492501 25479592 101257765 102588622 107767459 107793592 4351952 100383228 123409008 8065517 100836231
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