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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106435859   zinc finger CCCH domain-containing protein 64 
 ath-u.5   AT5G56900   CwfJ-like family protein / zinc finger (CCCH-type) family protein 
 gma-u.5   100809090   zinc finger CCCH domain-containing protein 64 
 gma-u.5   100782106   zinc finger CCCH domain-containing protein 64 
 vvi-u.5   100259266   zinc finger CCCH domain-containing protein 64 
 ppo-u.5   18100387   zinc finger CCCH domain-containing protein 64 
 mtr-u.5   25494236   zinc finger CCCH domain-containing protein 64 
 sly-u.5   101243673   zinc finger CCCH domain-containing protein 64 
 osa-u.5   4346865   zinc finger CCCH domain-containing protein 59-like 
 zma-u.5   100383201   uncharacterized LOC100383201 

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Top 50 coexpressed genes to 106435859 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106435859 (bna-r.1 coexpression data)

CoexMap"106435859"


bnaLOC106435859 | Entrez gene ID : 106435859    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (548 genes)  IEA  
GO CC
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (31 genes)  IEA  
GO MF
GO:0061632 [list] [network] RNA lariat debranching enzyme activator activity  (2 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_013732241.2 [sequence] [blastp]
XP_013732242.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 4,  cysk 1  (predict for XP_013732241.2)
nucl 5,  chlo 4,  cysk 1  (predict for XP_013732242.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_013732241.2)
mito 7  (predict for XP_013732242.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106435859
ath-u.5
for
AT5G56900
gma-u.5
for
100809090
gma-u.5
for
100782106
vvi-u.5
for
100259266
ppo-u.5
for
18100387
mtr-u.5
for
25494236
sly-u.5
for
101243673
osa-u.5
for
4346865
zma-u.5
for
100383201


Ortholog ID: 9740
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106435859 LOC106371485 LOC103845120 AT5G56900 LOC107887246 LOC107901111 LOC102610476 LOC100782106 LOC100809090 LOC100259266 LOC18100387 LOC25494236 LOC101243673 LOC102588813 LOC107778195 LOC107793378 LOC4346865 LOC100383201 LOC123103592 LOC123111799 LOC123395120 LOC8054618 LOC100836698 CHLRE_07g338900v5
Function* zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 CwfJ-like family protein / zinc finger (CCCH-type) family protein zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 64 zinc finger CCCH domain-containing protein 59-like uncharacterized LOC100383201 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 59 zinc finger CCCH domain-containing protein 59 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 9
bna04141 Protein processing in endoplasmic reticulum 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
gma03013 Nucleocytoplasmic transport 3
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03015 mRNA surveillance pathway 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03040 Spliceosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03083 Polycomb repressive complex 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03018 RNA degradation 3
zma03008 Ribosome biogenesis in eukaryotes 2
zma03040 Spliceosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106435859 106371485 103845120 835792 107887246 107901111 102610476 100782106 100809090 100259266 18100387 25494236 101243673 102588813 107778195 107793378 4346865 100383201 123103592 123111799 123395120 8054618 100836698 5718087
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