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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106436241   pre-mRNA-splicing factor SPF27 homolog 
 bna-r.1   106436118   pre-mRNA-splicing factor SPF27 homolog 
 bna-r.1   106347198   pre-mRNA-splicing factor SPF27 homolog 
 bna-r.1   106389046   pre-mRNA-splicing factor SPF27 homolog 
 bra-r.6   103869601   pre-mRNA-splicing factor SPF27 homolog 
 bra-r.6   103838786   pre-mRNA-splicing factor SPF27 homolog 
 ath-u.5   MOS4   modifier of snc1,4 
 ghi-r.1   107962288   pre-mRNA-splicing factor SPF27 homolog 
 ghi-r.1   107902058   pre-mRNA-splicing factor SPF27 homolog 
 cit-r.1   102608089   pre-mRNA-splicing factor SPF27 homolog 
 gma-u.5   100783349   pre-mRNA-splicing factor SPF27 homolog 
 gma-u.5   100777152   pre-mRNA-splicing factor SPF27 homolog 
 vvi-u.5   100254130   pre-mRNA-splicing factor SPF27 homolog 
 ppo-u.5   7462473   pre-mRNA-splicing factor SPF27 homolog 
 mtr-u.5   11414393   pre-mRNA-splicing factor SPF27 homolog 
 sly-u.5   101253172   pre-mRNA-splicing factor SPF27 homolog 
 sot-r.1   102605698   pre-mRNA-splicing factor SPF27 homolog 
 nta-r.1   107784675   pre-mRNA-splicing factor SPF27 homolog 
 nta-r.1   107763847   pre-mRNA-splicing factor SPF27 homolog 
 nta-r.1   107827641   pre-mRNA-splicing factor SPF27 homolog 
 osa-u.5   9272163   pre-mRNA-splicing factor SPF27 homolog 
 zma-u.5   100284614   BCAS2 protein 
 tae-r.2   123078109   pre-mRNA-splicing factor SPF27 homolog 
 tae-r.2   123069627   pre-mRNA-splicing factor SPF27 homolog 
 tae-r.2   123061036   pre-mRNA-splicing factor SPF27 homolog 
 hvu-r.1   123443459   pre-mRNA-splicing factor SPF27 homolog 
 sbi-r.1   8074502   pre-mRNA-splicing factor SPF27 homolog 
 bdi-r.1   100836755   pre-mRNA-splicing factor SPF27 homolog 
 cre-r.1   CHLRE_17g697350v5   uncharacterized protein 

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Top 50 coexpressed genes to 106436241 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106436241 (bna-r.1 coexpression data)

CoexMap"106436241"


bnaLOC106436241 | Entrez gene ID : 106436241    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 2 1 1 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0006397 [list] [network] mRNA processing  (684 genes)  IEA  
GO CC
GO:0000974 [list] [network] Prp19 complex  (51 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (154 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
Protein XP_013732654.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_013732654.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013732654.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106436241
bna-r.1
for
106436118
bna-r.1
for
106347198
bna-r.1
for
106389046
bra-r.6
for
103869601
bra-r.6
for
103838786
ath-u.5
for
MOS4
ghi-r.1
for
107962288
ghi-r.1
for
107902058
cit-r.1
for
102608089
gma-u.5
for
100783349
gma-u.5
for
100777152
vvi-u.5
for
100254130
ppo-u.5
for
7462473
mtr-u.5
for
11414393
sly-u.5
for
101253172
sot-r.1
for
102605698
nta-r.1
for
107784675
nta-r.1
for
107763847
nta-r.1
for
107827641
osa-u.5
for
9272163
zma-u.5
for
100284614
tae-r.2
for
123078109
tae-r.2
for
123069627
tae-r.2
for
123061036
hvu-r.1
for
123443459
sbi-r.1
for
8074502
bdi-r.1
for
100836755
cre-r.1
for
CHLRE_17g697350v5


Ortholog ID: 8016
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106436241 LOC106436118 LOC106389046 LOC103869601 LOC103838786 MOS4 LOC107962288 LOC107902058 LOC102608089 LOC100783349 LOC100777152 LOC100254130 LOC7462473 LOC11414393 LOC101253172 LOC102605698 LOC107784675 LOC107763847 LOC107827641 LOC9272163 LOC100284614 LOC123078109 LOC123069627 LOC123061036 LOC123443459 LOC8074502 LOC100836755 CHLRE_17g697350v5
Function* pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog modifier of snc1,4 pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog BCAS2 protein pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog pre-mRNA-splicing factor SPF27 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03015 mRNA surveillance pathway 3
bna04120 Ubiquitin mediated proteolysis 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03040 Spliceosome 4
ath03013 Nucleocytoplasmic transport 3
ath03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03040 Spliceosome 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04130 SNARE interactions in vesicular transport 3
ghi03040 Spliceosome 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit01200 Carbon metabolism 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma04130 SNARE interactions in vesicular transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 9
mtr03022 Basal transcription factors 4
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot03040 Spliceosome 2
sot00260 Glycine, serine and threonine metabolism 2
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03040 Spliceosome 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106436241 106436118 106389046 103869601 103838786 821343 107962288 107902058 102608089 100783349 100777152 100254130 7462473 11414393 101253172 102605698 107784675 107763847 107827641 9272163 100284614 123078109 123069627 123061036 123443459 8074502 100836755 66056867
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