ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106436440	uncharacterized LOC106436440
bna-r.1	BNAA05G33100D	uncharacterized BNAA05G33100D
bra-r.6	103850049	uncharacterized LOC103850049
bra-r.6	103858558	uncharacterized LOC103858558
ath-u.5	AT3G04300	RmlC-like cupins superfamily protein
ath-u.5	AT4G10300	RmlC-like cupins superfamily protein
ath-u.5	AT4G28703	RmlC-like cupins superfamily protein
ghi-r.1	107925737	uncharacterized LOC107925737
ghi-r.1	107928242	uncharacterized LOC107928242
cit-r.1	102630153	uncharacterized LOC102630153
cit-r.1	102607448	uncharacterized LOC102607448
cit-r.1	102606871	uncharacterized LOC102606871
gma-u.5	100499968	uncharacterized LOC100499968
gma-u.5	100500522	uncharacterized LOC100500522
vvi-u.5	100244771	uncharacterized LOC100244771
vvi-u.5	100256915	uncharacterized LOC100256915
vvi-u.5	100241271	cupin domain-containing protein-like
ppo-u.5	18104284	uncharacterized LOC18104284
ppo-u.5	7459530	uncharacterized LOC7459530
mtr-u.5	11428229	uncharacterized LOC11428229
mtr-u.5	11443706	uncharacterized LOC11443706
mtr-u.5	25484187	uncharacterized LOC25484187
sot-r.1	102580040	uncharacterized LOC102580040
sot-r.1	102585237	uncharacterized LOC102585237
nta-r.1	107786283	uncharacterized LOC107786283
osa-u.5	4336363	uncharacterized LOC4336363
osa-u.5	4335957	uncharacterized LOC4335957
osa-u.5	4330006	uncharacterized LOC4330006
zma-u.5	100284006	enzyme of the cupin superfamily
zma-u.5	100285067	uncharacterized LOC100285067
zma-u.5	100282274	enzyme of the cupin superfamily
tae-r.2	123189320	uncharacterized LOC123189320
hvu-r.1	123430331	uncharacterized LOC123430331
hvu-r.1	123401931	uncharacterized LOC123401931
hvu-r.1	123426823	uncharacterized LOC123426823
sbi-r.1	8072484	uncharacterized LOC8072484
sbi-r.1	110436317	uncharacterized LOC110436317
bdi-r.1	100832985	uncharacterized LOC100832985
bdi-r.1	100840091	uncharacterized LOC100840091
bdi-r.1	100825165	uncharacterized LOC100825165
cre-r.1	CHLRE_01g013150v5	uncharacterized protein

Top 50 coexpressed genes to 106436440 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106436440 (bna-r.1 coexpression data)

CoexMap"106436440"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013732861.2 [sequence] [blastp]
XP_013732862.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, cyto 3, cyto_nucl 3	(predict for XP_013732861.2)
cyto 4, chlo 3, nucl 3	(predict for XP_013732862.2)

Subcellular
localization
TargetP

other 9	(predict for XP_013732861.2)
other 8	(predict for XP_013732862.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106436440	bna-r.1 for BNAA05G33100D	bra-r.6 for 103850049	bra-r.6 for 103858558	ath-u.5 for AT3G04300	ath-u.5 for AT4G10300	ath-u.5 for AT4G28703	ghi-r.1 for 107925737	ghi-r.1 for 107928242	cit-r.1 for 102630153	cit-r.1 for 102607448	cit-r.1 for 102606871	gma-u.5 for 100499968	gma-u.5 for 100500522	vvi-u.5 for 100244771	vvi-u.5 for 100256915	vvi-u.5 for 100241271	ppo-u.5 for 18104284	ppo-u.5 for 7459530	mtr-u.5 for 11428229	mtr-u.5 for 11443706	mtr-u.5 for 25484187	sot-r.1 for 102580040	sot-r.1 for 102585237	nta-r.1 for 107786283	osa-u.5 for 4336363	osa-u.5 for 4335957	osa-u.5 for 4330006	zma-u.5 for 100284006	zma-u.5 for 100285067	zma-u.5 for 100282274	tae-r.2 for 123189320	hvu-r.1 for 123430331	hvu-r.1 for 123401931	hvu-r.1 for 123426823	sbi-r.1 for 8072484	sbi-r.1 for 110436317	bdi-r.1 for 100832985	bdi-r.1 for 100840091	bdi-r.1 for 100825165	cre-r.1 for CHLRE_01g013150v5

Ortholog

Ortholog ID: 1200

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC106416136

uncharacterized BNAC03G28910D

uncharacterized LOC103850049

uncharacterized LOC103854202

RmlC-like cupins superfamily protein

uncharacterized LOC107928242

uncharacterized LOC107939998

uncharacterized LOC107909172

uncharacterized LOC102630153

uncharacterized LOC102607448

uncharacterized LOC102606871

uncharacterized LOC100499968

uncharacterized LOC100500522

uncharacterized LOC100244771

uncharacterized LOC100256915

cupin domain-containing protein-like

uncharacterized LOC18104284

uncharacterized LOC7459530

uncharacterized LOC11428229

uncharacterized LOC25484187

uncharacterized LOC25484496

uncharacterized LOC102580040

uncharacterized LOC102585237

uncharacterized LOC107786283

uncharacterized LOC4336363

uncharacterized LOC4335957

uncharacterized LOC4330006

enzyme of the cupin superfamily

uncharacterized LOC103646215

uncharacterized LOC103646217

uncharacterized LOC123189320

uncharacterized LOC123430331

uncharacterized LOC123401931

uncharacterized LOC123426823

uncharacterized LOC8072484

uncharacterized LOC8064462

uncharacterized LOC100832985

uncharacterized LOC100840091

uncharacterized LOC100825165

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00630	Glyoxylate and dicarboxylate metabolism	3
bna01200	Carbon metabolism	3
bna00020	Citrate cycle (TCA cycle)	2
bna00270	Cysteine and methionine metabolism	2
bna00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi00620	Pyruvate metabolism	2
ghi00860	Porphyrin metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6
ghi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma00051	Fructose and mannose metabolism	2
gma00500	Starch and sucrose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04626	Plant-pathogen interaction	4
gma02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	8
vvi00195	Photosynthesis	5
vvi00710	Carbon fixation by Calvin cycle	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	6
ppo00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	3
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	5
mtr00710	Carbon fixation by Calvin cycle	4
mtr00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	3
sot00010	Glycolysis / Gluconeogenesis	2
sot00030	Pentose phosphate pathway	2
sot00052	Galactose metabolism	2
sot00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00630	Glyoxylate and dicarboxylate metabolism	7
nta01200	Carbon metabolism	7
nta04146	Peroxisome	4
nta00062	Fatty acid elongation	2
nta01040	Biosynthesis of unsaturated fatty acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00710	Carbon fixation by Calvin cycle	3
osa01200	Carbon metabolism	3
osa01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00592	alpha-Linolenic acid metabolism	4
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00270	Cysteine and methionine metabolism	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	3
bdi00630	Glyoxylate and dicarboxylate metabolism	3
bdi01200	Carbon metabolism	3
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

106416136

106423561

103850049

103854202

819585

826622

828989

107928242

107939998

107909172

102630153

102607448

102606871

100499968

100500522

100244771

100256915

100241271

18104284

7459530

11428229

25484187

25484496

102580040

102585237

107786283

4336363

4335957

4330006

100284006

103646215

103646217

123189320

123430331

123401931

123426823

8072484

8064462

100832985

100840091

100825165

5715067

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Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	sly
Paralog	2	2	3	2	3	2	3	2	3	2	1	3	3	1	3	2	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106436440 (bna-r.1 coexpression data)

Top 50 enrichment test to 106436440 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**