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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106439888   transcription factor TCP7 
 bna-r.1   125577739   transcription factor TCP7-like 
 bna-r.1   106406772   transcription factor TCP21 
 bna-r.1   111210456   transcription factor TCP21 
 bra-r.6   103847150   transcription factor TCP21 
 bra-r.6   117130946   transcription factor TCP21-like 
 ath-u.5   TCP11   TCP family transcription factor 
 ath-u.5   AT5G23280   TCP family transcription factor 
 ghi-r.1   107946100   transcription factor TCP7 
 ghi-r.1   107942277   transcription factor TCP7 
 ghi-r.1   107919962   transcription factor TCP21 
 cit-r.1   102623358   transcription factor TCP7 
 cit-r.1   102620061   transcription factor TCP23-like 
 gma-u.5   100800443   transcription factor TCP7 
 gma-u.5   100799005   transcription factor TCP7 
 gma-u.5   100795254   transcription factor TCP7 
 vvi-u.5   100253181   transcription factor TCP7 
 ppo-u.5   7457173   transcription factor TCP21 
 mtr-u.5   11423615   transcription factor TCP7 
 mtr-u.5   11423879   transcription factor TCP7 
 sly-u.5   TCP15   TCP transcription factor 15 
 sly-u.5   TCP14   TCP transcription factor 14 
 sot-r.1   102605188   transcription factor TCP7 
 sot-r.1   102592624   transcription factor TCP7-like 
 nta-r.1   107830175   transcription factor TCP7 
 nta-r.1   107769959   transcription factor TCP7-like 
 nta-r.1   107819279   transcription factor TCP7-like 
 osa-u.5   9271589   transcription factor PCF3-like 
 osa-u.5   9272106   transcription factor TCP7 
 zma-u.5   100278144   uncharacterized LOC100278144 
 tae-r.2   123129152   transcription factor TCP21 
 tae-r.2   123140068   transcription factor TCP21 
 tae-r.2   123146326   transcription factor TCP21 
 hvu-r.1   123403220   transcription factor TCP21-like 
 sbi-r.1   8076285   transcription factor PCF3 
 sbi-r.1   8084453   transcription factor TCP7 
 bdi-r.1   104583882   transcription factor TCP7-like 

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Top 50 coexpressed genes to 106439888 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106439888 (bna-r.1 coexpression data)

CoexMap"106439888"


bnaLOC106439888 | Entrez gene ID : 106439888    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 3 1 1 2 2 2 3 2 1 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04712 [list] [network] Circadian rhythm - plant (144 genes)
GO BP
GO:0042752 [list] [network] regulation of circadian rhythm  (59 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (2444 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
Protein XP_013736882.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_013736882.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_013736882.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106439888
bna-r.1
for
125577739
bna-r.1
for
106406772
bna-r.1
for
111210456
bra-r.6
for
103847150
bra-r.6
for
117130946
ath-u.5
for
TCP11
ath-u.5
for
AT5G23280
ghi-r.1
for
107946100
ghi-r.1
for
107942277
ghi-r.1
for
107919962
cit-r.1
for
102623358
cit-r.1
for
102620061
gma-u.5
for
100800443
gma-u.5
for
100799005
gma-u.5
for
100795254
vvi-u.5
for
100253181
ppo-u.5
for
7457173
mtr-u.5
for
11423615
mtr-u.5
for
11423879
sly-u.5
for
TCP15
sly-u.5
for
TCP14
sot-r.1
for
102605188
sot-r.1
for
102592624
nta-r.1
for
107830175
nta-r.1
for
107769959
nta-r.1
for
107819279
osa-u.5
for
9271589
osa-u.5
for
9272106
zma-u.5
for
100278144
tae-r.2
for
123129152
tae-r.2
for
123140068
tae-r.2
for
123146326
hvu-r.1
for
123403220
sbi-r.1
for
8076285
sbi-r.1
for
8084453
bdi-r.1
for
104583882


Ortholog ID: 2578
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa osa zma tae tae tae hvu sbi sbi bdi
Symbol LOC125577739 LOC106348344 LOC106419010 LOC103865427 LOC103854905 LOC117131903 TCP11 AT5G23280 LOC107919962 LOC107886883 LOC107894056 LOC102623358 LOC102620061 LOC100799005 LOC100795254 LOC100786264 LOC100253181 LOC7457173 LOC11423615 LOC11423879 TCP15 TCP14 LOC102605188 LOC102592624 LOC107830175 LOC107769959 LOC107819279 LOC9271589 LOC9272106 LOC100278144 LOC123129152 LOC123140068 LOC123146326 LOC123403220 LOC8076285 LOC8084453 LOC104583882
Function* transcription factor TCP7-like transcription factor TCP7-like transcription factor TCP21 transcription factor TCP7 transcription factor TCP7 transcription factor TCP21 TCP family transcription factor TCP family transcription factor transcription factor TCP21 transcription factor TCP21 transcription factor TCP21 transcription factor TCP7 transcription factor TCP23-like transcription factor TCP7 transcription factor TCP7 transcription factor TCP7 transcription factor TCP7 transcription factor TCP21 transcription factor TCP7 transcription factor TCP7 TCP transcription factor 15 TCP transcription factor 14 transcription factor TCP7 transcription factor TCP7-like transcription factor TCP7 transcription factor TCP7-like transcription factor TCP7-like transcription factor PCF3-like transcription factor TCP7 uncharacterized LOC100278144 transcription factor TCP21 transcription factor TCP21 transcription factor TCP21 transcription factor TCP21-like transcription factor PCF3 transcription factor TCP7 transcription factor TCP7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03410 Base excision repair 2
bra00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi04145 Phagosome 2
sbi04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125577739 106348344 106419010 103865427 103854905 117131903 830730 832392 107919962 107886883 107894056 102623358 102620061 100799005 100795254 100786264 100253181 7457173 11423615 11423879 100736520 100736457 102605188 102592624 107830175 107769959 107819279 9271589 9272106 100278144 123129152 123140068 123146326 123403220 8076285 8084453 104583882
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