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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106440115   zinc finger CCCH domain-containing protein 44-like 
 bna-r.1   111200300   zinc finger CCCH domain-containing protein 44-like 
 bna-r.1   106440024   zinc finger CCCH domain-containing protein 44-like 
 bna-r.1   106367711   zinc finger CCCH domain-containing protein 44 
 bra-r.6   103860692   zinc finger CCCH domain-containing protein 44 
 bra-r.6   103841028   zinc finger CCCH domain-containing protein 44 
 bra-r.6   103837769   zinc finger CCCH domain-containing protein 19 
 ath-u.5   NERD   GW repeat- and PHD finger-containing protein NERD 
 ath-u.5   AT3G51120   zinc finger CCCH domain-containing protein 44 
 ghi-r.1   107913021   zinc finger CCCH domain-containing protein 44 
 ghi-r.1   107908825   zinc finger CCCH domain-containing protein 19 
 ghi-r.1   107896551   zinc finger CCCH domain-containing protein 44 
 cit-r.1   102630078   zinc finger CCCH domain-containing protein 19-like 
 cit-r.1   102630590   zinc finger CCCH domain-containing protein 44 
 gma-u.5   100815079   zinc finger CCCH domain-containing protein 19 
 gma-u.5   100801151   zinc finger CCCH domain-containing protein 44 
 gma-u.5   100810823   zinc finger CCCH domain-containing protein 44 
 vvi-u.5   104878757   zinc finger CCCH domain-containing protein 19 
 vvi-u.5   100252322   zinc finger CCCH domain-containing protein 44 
 ppo-u.5   18099224   zinc finger CCCH domain-containing protein 44 
 ppo-u.5   7494298   zinc finger CCCH domain-containing protein 19 
 ppo-u.5   7480162   zinc finger CCCH domain-containing protein 44-like 
 mtr-u.5   25494556   zinc finger CCCH domain-containing protein 44 
 mtr-u.5   120579645   zinc finger CCCH domain-containing protein 19 
 mtr-u.5   11411608   zinc finger CCCH domain-containing protein 19 
 sly-u.5   101249239   zinc finger CCCH domain-containing protein 19 
 sly-u.5   101248841   zinc finger CCCH domain-containing protein 44 
 sly-u.5   101250266   zinc finger CCCH domain-containing protein 44-like 
 sot-r.1   102605346   zinc finger CCCH domain-containing protein 44-like 
 sot-r.1   102598818   zinc finger CCCH domain-containing protein 44 
 sot-r.1   102598651   zinc finger CCCH domain-containing protein 19 
 nta-r.1   107764512   zinc finger CCCH domain-containing protein 19 
 nta-r.1   107831255   zinc finger CCCH domain-containing protein 44 
 nta-r.1   107799442   zinc finger CCCH domain-containing protein 19-like 
 osa-u.5   9269757   zinc finger CCCH domain-containing protein 19 
 osa-u.5   4349095   uncharacterized LOC4349095 
 zma-u.5   103643376   zinc finger CCCH domain-containing protein 44 
 zma-u.5   103636656   zinc finger CCCH domain-containing protein 19 
 zma-u.5   103626106   zinc finger CCCH domain-containing protein 44 
 tae-r.2   123122289   zinc finger CCCH domain-containing protein 19 
 tae-r.2   123104525   zinc finger CCCH domain-containing protein 19 
 tae-r.2   123112805   zinc finger CCCH domain-containing protein 19 
 hvu-r.1   123400050   zinc finger CCCH domain-containing protein 19-like 
 hvu-r.1   123434274   zinc finger CCCH domain-containing protein 19-like 
 sbi-r.1   8065858   zinc finger CCCH domain-containing protein 44 
 sbi-r.1   8075563   zinc finger CCCH domain-containing protein 44 
 bdi-r.1   100835763   zinc finger CCCH domain-containing protein 19 
 bdi-r.1   100833705   zinc finger CCCH domain-containing protein 19 

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Top 50 coexpressed genes to 106440115 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106440115 (bna-r.1 coexpression data)

CoexMap"106440115"


bnaLOC106440115 | Entrez gene ID : 106440115    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 2 3 3 3 3 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013737170.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cysk 1  (predict for XP_013737170.2)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_013737170.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106440115
bna-r.1
for
111200300
bna-r.1
for
106440024
bna-r.1
for
106367711
bra-r.6
for
103860692
bra-r.6
for
103841028
bra-r.6
for
103837769
ath-u.5
for
NERD
ath-u.5
for
AT3G51120
ghi-r.1
for
107913021
ghi-r.1
for
107908825
ghi-r.1
for
107896551
cit-r.1
for
102630078
cit-r.1
for
102630590
gma-u.5
for
100815079
gma-u.5
for
100801151
gma-u.5
for
100810823
vvi-u.5
for
104878757
vvi-u.5
for
100252322
ppo-u.5
for
18099224
ppo-u.5
for
7494298
ppo-u.5
for
7480162
mtr-u.5
for
25494556
mtr-u.5
for
120579645
mtr-u.5
for
11411608
sly-u.5
for
101249239
sly-u.5
for
101248841
sly-u.5
for
101250266
sot-r.1
for
102605346
sot-r.1
for
102598818
sot-r.1
for
102598651
nta-r.1
for
107764512
nta-r.1
for
107831255
nta-r.1
for
107799442
osa-u.5
for
9269757
osa-u.5
for
4349095
zma-u.5
for
103643376
zma-u.5
for
103636656
zma-u.5
for
103626106
tae-r.2
for
123122289
tae-r.2
for
123104525
tae-r.2
for
123112805
hvu-r.1
for
123400050
hvu-r.1
for
123434274
sbi-r.1
for
8065858
sbi-r.1
for
8075563
bdi-r.1
for
100835763
bdi-r.1
for
100833705


Ortholog ID: 2531
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC111200300 LOC106440024 LOC106347043 LOC103860692 LOC103841028 LOC103837769 NERD AT3G51120 LOC107913021 LOC107908825 LOC107927924 LOC102630078 LOC102630590 LOC100801151 LOC100810823 LOC121174757 LOC104878757 LOC100252322 LOC18099224 LOC7494298 LOC7480162 LOC25494556 LOC120579645 LOC11411608 LOC101249239 LOC101248841 LOC101250266 LOC102605346 LOC102598818 LOC102598651 LOC107764512 LOC107784333 LOC107766119 LOC9269757 LOC4349095 LOC103636656 LOC103626106 LOC100194316 LOC123122289 LOC123104525 LOC123112805 LOC123400050 LOC123434274 LOC8065858 LOC8075563 LOC100835763 LOC100833705
Function* zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 GW repeat- and PHD finger-containing protein NERD zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19-like zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 44-like zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19-like zinc finger CCCH domain-containing protein 19 uncharacterized LOC4349095 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 44 Zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19-like zinc finger CCCH domain-containing protein 19-like zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 44 zinc finger CCCH domain-containing protein 19 zinc finger CCCH domain-containing protein 19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra00310 Lysine degradation 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111200300 106440024 106347043 103860692 103841028 103837769 816147 824276 107913021 107908825 107927924 102630078 102630590 100801151 100810823 121174757 104878757 100252322 18099224 7494298 7480162 25494556 120579645 11411608 101249239 101248841 101250266 102605346 102598818 102598651 107764512 107784333 107766119 9269757 4349095 103636656 103626106 100194316 123122289 123104525 123112805 123400050 123434274 8065858 8075563 100835763 100833705
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