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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106440237   RGG repeats nuclear RNA binding protein B 
 ath-u.5   AT4G16830   Hyaluronan / mRNA binding family 
 ath-u.5   AT4G17520   Hyaluronan / mRNA binding family 
 ath-u.5   AT5G47210   Hyaluronan / mRNA binding family 
 gma-u.5   100805110   RGG repeats nuclear RNA binding protein A 
 gma-u.5   100807657   uncharacterized LOC100807657 
 gma-u.5   100814825   RGG repeats nuclear RNA binding protein A 
 vvi-u.5   100265608   RGG repeats nuclear RNA binding protein A 
 vvi-u.5   100259885   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   18094574   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   18105076   RGG repeats nuclear RNA binding protein A 
 ppo-u.5   7461996   RGG repeats nuclear RNA binding protein A 
 mtr-u.5   11438402   RGG repeats nuclear RNA binding protein A 
 mtr-u.5   25500060   RGG repeats nuclear RNA binding protein A 
 sly-u.5   101255921   plasminogen activator inhibitor 1 RNA-binding protein-like 
 sly-u.5   101256310   RGG repeats nuclear RNA binding protein A 
 sly-u.5   101260416   RGG repeats nuclear RNA binding protein A-like 
 osa-u.5   4339782   RGG repeats nuclear RNA binding protein A 
 osa-u.5   4339423   RGG repeats nuclear RNA binding protein A 
 osa-u.5   4324661   RGG repeats nuclear RNA binding protein A 
 zma-u.5   103651256   RGG repeats nuclear RNA binding protein C 
 zma-u.5   100282553   RGG repeats nuclear RNA binding protein 
 zma-u.5   100282188   RGG repeats nuclear RNA binding protein 

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Top 50 coexpressed genes to 106440237 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106440237 (bna-r.1 coexpression data)

CoexMap"106440237"


bnaLOC106440237 | Entrez gene ID : 106440237    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 3 3 2 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013737312.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  extr 1  (predict for XP_013737312.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_013737312.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106440237

.
ath-u.5
for
AT4G16830

.
ath-u.5
for
AT4G17520

.
ath-u.5
for
AT5G47210

.
gma-u.5
for
100805110

.
gma-u.5
for
100807657

.
gma-u.5
for
100814825

.
vvi-u.5
for
100265608

.
vvi-u.5
for
100259885

.
ppo-u.5
for
18094574

.
ppo-u.5
for
18105076

.
ppo-u.5
for
7461996

.
mtr-u.5
for
11438402

.
mtr-u.5
for
25500060

.
sly-u.5
for
101255921

.
sly-u.5
for
101256310

.
sly-u.5
for
101260416

.
osa-u.5
for
4339782

.
osa-u.5
for
4339423

.
osa-u.5
for
4324661

.
zma-u.5
for
103651256

.
zma-u.5
for
100282553

.
zma-u.5
for
100282188

.


Ortholog ID: 995
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT4G17520 AT5G47210 LOC100816645 LOC100791259 LOC101256310 LOC101260416 LOC4324661 LOC4339782 LOC100282188 LOC103631509 LOC103839539 LOC103855456 LOC100259885 LOC100265608 LOC7461996 LOC7453918 LOC11438402 LOC25500060 LOC123064581 LOC123062033 LOC123448634 LOC123444307 LOC107929374 LOC107929674 LOC106425366 LOC106400793 CHLRE_09g393358v5 LOC8082208 LOC8059196 LOC102590612 RGGA LOC102609479 LOC100837480 LOC104582803 LOC107782412 LOC107793183
Function* Hyaluronan / mRNA binding family Hyaluronan / mRNA binding family RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein C RGG repeats nuclear RNA binding protein B RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A-like RGG repeats nuclear RNA binding protein C-like uncharacterized protein RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein C plasminogen activator inhibitor 1 RNA-binding protein-like nuclear RNA binding protein RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A RGG repeats nuclear RNA binding protein A plasminogen activator inhibitor 1 RNA-binding protein-like RGG repeats nuclear RNA binding protein A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 5
vvi03010 Ribosome 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae04141 Protein processing in endoplasmic reticulum 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03040 Spliceosome 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827467 834767 100816645 100791259 101256310 101260416 4324661 4339782 100282188 103631509 103839539 103855456 100259885 100265608 7461996 7453918 11438402 25500060 123064581 123062033 123448634 123444307 107929374 107929674 106425366 106400793 5720271 8082208 8059196 102590612 102577886 102609479 100837480 104582803 107782412 107793183
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