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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106440667   probable chalcone--flavanone isomerase 3 
 bna-r.1   106419065   probable chalcone--flavanone isomerase 3 
 bra-r.6   103846880   probable chalcone--flavonone isomerase 3 
 ath-u.5   CHIL   Chalcone-flavanone isomerase family protein 
 ghi-r.1   107931587   probable chalcone--flavonone isomerase 3 
 ghi-r.1   107962221   probable chalcone--flavonone isomerase 3 
 cit-r.1   102613490   chalcone isomerase-like protein 2 
 gma-u.5   CHI4A   chalcone isomerase 4A 
 gma-u.5   CHI4B   chalcone isomerase 4B 
 vvi-u.5   100255217   chalcone isomerase-like protein 2 
 ppo-u.5   7459237   chalcone isomerase-like protein 2 
 mtr-u.5   25489829   probable chalcone--flavonone isomerase 3 
 sly-u.5   101266223   chalcone isomerase-like protein 2 
 sot-r.1   102583606   probable chalcone--flavonone isomerase 3 
 nta-r.1   107810515   chalcone isomerase-like protein 2 
 nta-r.1   107770091   chalcone isomerase-like protein 2 
 osa-u.5   4349607   chalcone isomerase-like protein 2 
 osa-u.5   4351321   chalcone isomerase-like protein 2 
 zma-u.5   100284018   chalcone--flavonone isomerase 
 tae-r.2   123120374   chalcone isomerase-like protein 2 
 tae-r.2   123111354   chalcone isomerase-like protein 2 
 tae-r.2   123103161   chalcone isomerase-like protein 2 
 hvu-r.1   123400209   chalcone isomerase-like protein 2 
 sbi-r.1   110429758   probable chalcone--flavonone isomerase 3 
 bdi-r.1   100840048   probable chalcone--flavonone isomerase 3 

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Top 50 coexpressed genes to 106440667 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106440667 (bna-r.1 coexpression data)

CoexMap"106440667"


bnaLOC106440667 | Entrez gene ID : 106440667    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 2 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00941 [list] [network] Flavonoid biosynthesis (93 genes)
GO BP
GO CC
GO MF
GO:0016872 [list] [network] intramolecular lyase activity  (29 genes)  IEA  
Protein XP_013737847.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 7,  extr 2  (predict for XP_013737847.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_013737847.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106440667
bna-r.1
for
106419065
bra-r.6
for
103846880
ath-u.5
for
CHIL
ghi-r.1
for
107931587
ghi-r.1
for
107962221
cit-r.1
for
102613490
gma-u.5
for
CHI4A
gma-u.5
for
CHI4B
vvi-u.5
for
100255217
ppo-u.5
for
7459237
mtr-u.5
for
25489829
sly-u.5
for
101266223
sot-r.1
for
102583606
nta-r.1
for
107810515
nta-r.1
for
107770091
osa-u.5
for
4349607
osa-u.5
for
4351321
zma-u.5
for
100284018
tae-r.2
for
123120374
tae-r.2
for
123111354
tae-r.2
for
123103161
hvu-r.1
for
123400209
sbi-r.1
for
110429758
bdi-r.1
for
100840048


Ortholog ID: 10277
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi
Symbol LOC106440667 LOC106419065 LOC103846880 CHIL LOC107931587 LOC107962221 LOC102613490 CHI4A CHI4B LOC100255217 LOC7459237 LOC25489829 LOC101266223 LOC102583606 LOC107810515 LOC107770091 LOC4349607 LOC4351321 LOC100284018 LOC123120374 LOC123111354 LOC123103161 LOC123400209 LOC110429758 LOC100840048
Function* probable chalcone--flavanone isomerase 3 probable chalcone--flavanone isomerase 3 probable chalcone--flavonone isomerase 3 Chalcone-flavanone isomerase family protein probable chalcone--flavonone isomerase 3 probable chalcone--flavonone isomerase 3 chalcone isomerase-like protein 2 chalcone isomerase 4A chalcone isomerase 4B chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 probable chalcone--flavonone isomerase 3 chalcone isomerase-like protein 2 probable chalcone--flavonone isomerase 3 chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 chalcone--flavonone isomerase chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 chalcone isomerase-like protein 2 probable chalcone--flavonone isomerase 3 probable chalcone--flavonone isomerase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 12
bna04712 Circadian rhythm - plant 8
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 11
bna04712 Circadian rhythm - plant 8
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 9
bra00940 Phenylpropanoid biosynthesis 3
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 2
ath00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 10
ghi03083 Polycomb repressive complex 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 8
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 6
cit00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 6
gma00640 Propanoate metabolism 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00940 Phenylpropanoid biosynthesis 3
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00640 Propanoate metabolism 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 8
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 8
mtr04712 Circadian rhythm - plant 5
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 7
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 10
nta04075 Plant hormone signal transduction 4
nta04712 Circadian rhythm - plant 4
nta00380 Tryptophan metabolism 2
nta00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 11
nta04712 Circadian rhythm - plant 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 5
osa00941 Flavonoid biosynthesis 4
osa00270 Cysteine and methionine metabolism 2
osa01230 Biosynthesis of amino acids 2
osa00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00941 Flavonoid biosynthesis 7
osa00944 Flavone and flavonol biosynthesis 2
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 10
zma04712 Circadian rhythm - plant 2
zma00940 Phenylpropanoid biosynthesis 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 16
tae04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 17
tae04712 Circadian rhythm - plant 8
tae00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 15
tae04712 Circadian rhythm - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 6
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 10
sbi04712 Circadian rhythm - plant 8
sbi01240 Biosynthesis of cofactors 3
sbi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 6
bdi00940 Phenylpropanoid biosynthesis 3
bdi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106440667 106419065 103846880 830409 107931587 107962221 102613490 732547 778027 100255217 7459237 25489829 101266223 102583606 107810515 107770091 4349607 4351321 100284018 123120374 123111354 123103161 123400209 110429758 100840048
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