ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106440837	ycf49-like protein
bna-r.1	106374372	ycf49-like protein
bra-r.6	103860381	ycf49-like protein
ath-u.5	AT4G22830	YCF49-like protein
ghi-r.1	107946975	uncharacterized LOC107946975
ghi-r.1	107936417	uncharacterized LOC107936417
cit-r.1	102616293	uncharacterized LOC102616293
gma-u.5	100306551	uncharacterized LOC100306551
gma-u.5	100805141	ycf49-like protein
ppo-u.5	7478095	uncharacterized LOC7478095
sly-u.5	101259562	uncharacterized LOC101259562
sly-u.5	101244306	uncharacterized LOC101244306
sot-r.1	102602685	ycf49-like protein
sot-r.1	102579570	ycf49-like protein
nta-r.1	107793784	uncharacterized LOC107793784
nta-r.1	107795093	uncharacterized LOC107795093
nta-r.1	107785110	uncharacterized LOC107785110
osa-u.5	4335622	uncharacterized LOC4335622
zma-u.5	103647597	Ycf49-like protein
tae-r.2	123122228	ycf49-like protein
tae-r.2	123104454	ycf49-like protein
sbi-r.1	8054862	ycf49-like protein
bdi-r.1	112268828	ycf49-like protein
cre-r.1	CHLRE_12g555400v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_013738056.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, vacu 1, nucl 1, cyto 1, plas 1, extr 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_013738056.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013738056.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106440837	bna-r.1 for 106374372	bra-r.6 for 103860381	ath-u.5 for AT4G22830	ghi-r.1 for 107946975	ghi-r.1 for 107936417	cit-r.1 for 102616293	gma-u.5 for 100306551	gma-u.5 for 100805141	ppo-u.5 for 7478095	sly-u.5 for 101259562	sly-u.5 for 101244306	sot-r.1 for 102602685	sot-r.1 for 102579570	nta-r.1 for 107793784	nta-r.1 for 107795093	nta-r.1 for 107785110	osa-u.5 for 4335622	zma-u.5 for 103647597	tae-r.2 for 123122228	tae-r.2 for 123104454	sbi-r.1 for 8054862	bdi-r.1 for 112268828	cre-r.1 for CHLRE_12g555400v5

Ortholog

Ortholog ID: 9605

Species

bna

bra

ath

ghi

cit

gma

ppo

sly

sot

nta

osa

zma

tae

sbi

bdi

cre

Symbol

Function^*

ycf49-like protein

YCF49-like protein

uncharacterized LOC107946975

uncharacterized LOC107936417

uncharacterized LOC102616293

uncharacterized LOC100306551

ycf49-like protein

uncharacterized LOC7478095

uncharacterized LOC101259562

uncharacterized LOC101244306

ycf49-like protein

uncharacterized LOC107793784

uncharacterized LOC107795093

uncharacterized LOC107786580

uncharacterized LOC4335622

Ycf49-like protein

ycf49-like protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00330	Arginine and proline metabolism	2
gma00360	Phenylalanine metabolism	2
gma00380	Tryptophan metabolism	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	8
ppo00710	Carbon fixation by Calvin cycle	7
ppo01230	Biosynthesis of amino acids	6
ppo00030	Pentose phosphate pathway	3
ppo00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	4
sly01200	Carbon metabolism	3
sly00020	Citrate cycle (TCA cycle)	2
sly00620	Pyruvate metabolism	2
sly00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2
sot03010	Ribosome	2
sot00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00710	Carbon fixation by Calvin cycle	3
sbi01200	Carbon metabolism	3
sbi00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
sbi01240	Biosynthesis of cofactors	3
sbi00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01240	Biosynthesis of cofactors	2
cre00740	Riboflavin metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106440837

106374372

103860381

828382

107946975

107936417

102616293

100306551

100805141

7478095

101259562

101244306

102602685

102579570

107793784

107795093

107786580

4335622

103647597

123122228

123104454

8054862

112268828

5719735

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106440837 (bna-r.1 coexpression data)

Top 50 enrichment test to 106440837 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	ppo	sly	sot	nta	osa	zma	tae	sbi	bdi	cre	hvu	vvi	mtr
Paralog	2	1	1	2	1	2	1	2	2	3	1	1	2	1	1	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106440837 (bna-r.1 coexpression data)

Top 50 enrichment test to 106440837 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**