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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106441949   F-box protein FBX14 
 ath-u.5   AFB4   RNI-like superfamily protein 
 ath-u.5   AFB5   auxin F-box protein 5 
 gma-u.5   100807836   transport inhibitor response 1-like protein 
 gma-u.5   100799915   transport inhibitor response 1-like protein 
 gma-u.5   100776213   transport inhibitor response 1-like protein 
 vvi-u.5   100245501   transport inhibitor response 1-like protein 
 ppo-u.5   7486562   transport inhibitor response 1-like protein 
 ppo-u.5   7467186   transport inhibitor response 1-like protein 
 mtr-u.5   11433686   transport inhibitor response 1-like protein 
 mtr-u.5   11435177   transport inhibitor response 1-like protein 
 sly-u.5   100316900   LeTIR 
 osa-u.5   4330795   transport inhibitor response 1-like protein 
 zma-u.5   100279510   uncharacterized LOC100279510 
 zma-u.5   100381660   F-box protein FBX14 

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Top 50 coexpressed genes to 106441949 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106441949 (bna-r.1 coexpression data)

CoexMap"106441949"


bnaLOC106441949 | Entrez gene ID : 106441949    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 2 3 1 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (170 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (134 genes)  IEA  
GO MF
Protein XP_013739152.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  plas 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._plas 1  (predict for XP_013739152.2)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_013739152.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106441949

.
ath-u.5
for
AFB4

.
ath-u.5
for
AFB5

.
gma-u.5
for
100807836

.
gma-u.5
for
100799915

.
gma-u.5
for
100776213

.
vvi-u.5
for
100245501

.
ppo-u.5
for
7486562

.
ppo-u.5
for
7467186

.
mtr-u.5
for
11433686

.
mtr-u.5
for
11435177

.
sly-u.5
for
100316900

.
osa-u.5
for
4330795

.
zma-u.5
for
100279510

.
zma-u.5
for
100381660

.


Ortholog ID: 4955
Species ath ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol AFB4 AFB5 LOC100776213 LOC100807836 LOC100316900 LOC4330795 LOC100279510 LOC100381660 LOC103862050 LOC103858427 LOC100245501 LOC7486562 LOC7467186 LOC11435177 LOC11433686 LOC123156229 LOC123153170 LOC123401012 LOC123406992 LOC107957800 LOC107905067 LOC106388488 LOC106448164 LOC8075184 LOC102578575 LOC102608296 LOC100841232 LOC100841538 LOC107832817 LOC107764726
Function* RNI-like superfamily protein auxin F-box protein 5 transport inhibitor response 1-like protein transport inhibitor response 1-like protein LeTIR transport inhibitor response 1-like protein uncharacterized LOC100279510 F-box protein FBX14 F-box protein FBX14 transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein F-box protein FBX14 transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein transport inhibitor response 1-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly04382 Cornified envelope formation 4
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00290 Valine, leucine and isoleucine biosynthesis 2
mtr00650 Butanoate metabolism 2
mtr00660 C5-Branched dibasic acid metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae04141 Protein processing in endoplasmic reticulum 4
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828541 835062 100776213 100807836 100316900 4330795 100279510 100381660 103862050 103858427 100245501 7486562 7467186 11435177 11433686 123156229 123153170 123401012 123406992 107957800 107905067 106388488 106448164 8075184 102578575 102608296 100841232 100841538 107832817 107764726
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