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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G02760   RNI-like superfamily protein 
 ath-u.5   AT4G02740   F-box/RNI-like superfamily protein 
 gma-u.5   100786317   F-box protein At4g02760 
 gma-u.5   100306182   F-box/LRR-repeat protein 
 vvi-u.5   100254453   F-box protein SKIP17 
 ppo-u.5   7464680   F-box protein SKIP17 
 ppo-u.5   7480035   F-box protein SKIP17 
 mtr-u.5   25493504   F-box protein At4g02760 
 mtr-u.5   25499126   F-box protein At4g02760 

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Top 50 coexpressed genes to AT4G02760 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G02760 (ath-u.5 coexpression data)

CoexMap"106442027"


bnaLOC106442027 | Entrez gene ID : 106442027    
Species ath gma vvi ppo mtr nta bna osa tae bdi sot bra sbi hvu cit zma cre sly ghi
Paralog 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (170 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (134 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048632947.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  chlo 2  (predict for XP_048632947.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_048632947.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT4G02760

.
ath-u.5
for
AT4G02740

.
gma-u.5
for
100786317

.
gma-u.5
for
100306182

.
vvi-u.5
for
100254453

.
ppo-u.5
for
7464680

.
ppo-u.5
for
7480035

.
mtr-u.5
for
25493504

.
mtr-u.5
for
25499126

.


Ortholog ID: 6616
Species ath ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna cit nta nta
Symbol AT4G02760 AT4G02740 LOC100306182 LOC100786317 LOC103836716 LOC103836717 LOC100254453 LOC7480035 LOC7464680 LOC25493504 LOC25499126 LOC107910950 LOC107945012 LOC106443782 LOC102611208 LOC107832421 LOC107762854
Function* RNI-like superfamily protein F-box/RNI-like superfamily protein F-box/LRR-repeat protein F-box protein At4g02760 F-box protein At4g02760 F-box protein SKIP17 F-box protein SKIP17 F-box protein SKIP17 F-box protein SKIP17 F-box protein At4g02760 F-box protein At4g02760 F-box protein SKIP17 F-box protein SKIP17 F-box protein SKIP17-like F-box protein SKIP17-like F-box protein At4g02760 F-box protein At4g02760
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 4
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828184 828188 100306182 100786317 103836716 103836717 100254453 7480035 7464680 25493504 25499126 107910950 107945012 106443782 102611208 107832421 107762854
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