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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106446287   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 bna-r.1   106422372   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 bra-r.6   103833856   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 ath-u.5   AT4G11570   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 
 ghi-r.1   107920623   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 ghi-r.1   107922580   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 ghi-r.1   107929305   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 cit-r.1   102610582   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 gma-u.5   100798181   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 gma-u.5   100782347   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 vvi-u.5   100261521   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 ppo-u.5   7458173   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 ppo-u.5   7479315   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 mtr-u.5   11446398   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 sly-u.5   101258773   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 sot-r.1   102600557   sugar phosphatase YfbT 
 nta-r.1   107818467   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 nta-r.1   107823966   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 osa-u.5   4336633   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 osa-u.5   4347902   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 zma-u.5   541872   inhibitor of striate 1 
 zma-u.5   100285779   uncharacterized LOC100285779 
 tae-r.2   123095581   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 tae-r.2   123046357   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 tae-r.2   123054210   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 hvu-r.1   123428799   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 hvu-r.1   123427534   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 sbi-r.1   110432971   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 
 sbi-r.1   8071319   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 bdi-r.1   100842612   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 bdi-r.1   100830159   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 bdi-r.1   100828179   5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 
 cre-r.1   CHLRE_03g193300v5   uncharacterized protein 

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Top 50 coexpressed genes to 106446287 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106446287 (bna-r.1 coexpression data)

CoexMap"106446287"


bnaLOC106446287 | Entrez gene ID : 106446287    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 2 1 1 1 2 2 2 3 2 2 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00740 [list] [network] Riboflavin metabolism (53 genes)
bna01240 [list] [network] Biosynthesis of cofactors (726 genes)
GO BP
GO CC
GO MF
Protein XP_013743437.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 3,  nucl 1,  mito 1  (predict for XP_013743437.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_013743437.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106446287
bna-r.1
for
106422372
bra-r.6
for
103833856
ath-u.5
for
AT4G11570
ghi-r.1
for
107920623
ghi-r.1
for
107922580
ghi-r.1
for
107929305
cit-r.1
for
102610582
gma-u.5
for
100798181
gma-u.5
for
100782347
vvi-u.5
for
100261521
ppo-u.5
for
7458173
ppo-u.5
for
7479315
mtr-u.5
for
11446398
sly-u.5
for
101258773
sot-r.1
for
102600557
nta-r.1
for
107818467
nta-r.1
for
107823966
osa-u.5
for
4336633
osa-u.5
for
4347902
zma-u.5
for
541872
zma-u.5
for
100285779
tae-r.2
for
123095581
tae-r.2
for
123046357
tae-r.2
for
123054210
hvu-r.1
for
123428799
hvu-r.1
for
123427534
sbi-r.1
for
110432971
sbi-r.1
for
8071319
bdi-r.1
for
100842612
bdi-r.1
for
100830159
bdi-r.1
for
100828179
cre-r.1
for
CHLRE_03g193300v5


Ortholog ID: 5138
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre
Symbol LOC106446287 LOC106422372 LOC103833856 AT4G11570 LOC107922580 LOC107929305 LOC107963776 LOC102610582 LOC100798181 LOC100782347 LOC100261521 LOC7458173 LOC7479315 LOC11446398 LOC101258773 LOC102600557 LOC107818467 LOC107823966 LOC4336633 LOC4347902 LOC541872 LOC100285779 LOC123095581 LOC123087405 LOC123090511 LOC123428799 LOC123427534 LOC123446827 LOC110432971 LOC8071319 LOC100842612 LOC100830159 LOC100828179 CHLRE_03g193300v5
Function* 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic sugar phosphatase YfbT 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic inhibitor of striate 1 uncharacterized LOC100285779 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
bna00040 Pentose and glucuronate interconversions 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
bna00040 Pentose and glucuronate interconversions 2
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00230 Purine metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00740 Riboflavin metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00740 Riboflavin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo00740 Riboflavin metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 3
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 3
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma01230 Biosynthesis of amino acids 3
zma01240 Biosynthesis of cofactors 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04146 Peroxisome 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04075 Plant hormone signal transduction 3
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
hvu00740 Riboflavin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00740 Riboflavin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
bdi00740 Riboflavin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00740 Riboflavin metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106446287 106422372 103833856 826761 107922580 107929305 107963776 102610582 100798181 100782347 100261521 7458173 7479315 11446398 101258773 102600557 107818467 107823966 4336633 4347902 541872 100285779 123095581 123087405 123090511 123428799 123427534 123446827 110432971 8071319 100842612 100830159 100828179 5718698
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