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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106446838   pre-mRNA-splicing factor ISY1 homolog 
 ath-u.5   AT3G18790   pre-mRNA-splicing factor ISY1-like protein 
 gma-u.5   100783606   pre-mRNA-splicing factor ISY1 homolog 
 vvi-u.5   100250525   pre-mRNA-splicing factor ISY1 homolog-like 
 ppo-u.5   18107108   uncharacterized LOC18107108 
 mtr-u.5   11437391   pre-mRNA-splicing factor ISY1 homolog 
 sly-u.5   101262521   uncharacterized LOC101262521 
 osa-u.5   4329902   uncharacterized LOC4329902 
 zma-u.5   100282530   uncharacterized LOC100282530 

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Top 50 coexpressed genes to 106446838 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106446838 (bna-r.1 coexpression data)

CoexMap"106446838"


bnaLOC106446838 | Entrez gene ID : 106446838    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0000389 [list] [network] mRNA 3'-splice site recognition  (3 genes)  IEA  
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (7 genes)  IEA  
GO CC
GO:0071020 [list] [network] post-spliceosomal complex  (7 genes)  IEA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (31 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (51 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (222 genes)  IEA  
GO MF
Protein XP_013744100.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for XP_013744100.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013744100.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106446838

.
ath-u.5
for
AT3G18790

.
gma-u.5
for
100783606

.
vvi-u.5
for
100250525

.
ppo-u.5
for
18107108

.
mtr-u.5
for
11437391

.
sly-u.5
for
101262521

.
osa-u.5
for
4329902

.
zma-u.5
for
100282530

.


Ortholog ID: 6565
Species ath gma sly osa zma vvi ppo mtr tae tae ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G18790 LOC100778539 LOC101262521 LOC4329902 LOC100282530 LOC100250525 LOC18107108 LOC11437391 LOC123144742 LOC123127631 LOC107886001 LOC107924917 LOC125608968 LOC106451929 CHLRE_10g427150v5 LOC8072425 LOC102585139 LOC102627416 LOC100837197 LOC107813591 LOC107812596
Function* pre-mRNA-splicing factor ISY1-like protein pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC101262521 uncharacterized LOC4329902 uncharacterized LOC100282530 pre-mRNA-splicing factor ISY1 homolog-like uncharacterized LOC18107108 pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog uncharacterized protein pre-mRNA-splicing factor ISY1 homolog pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC102627416 pre-mRNA-splicing factor ISY1 homolog uncharacterized LOC107813591 uncharacterized LOC107812596
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03015 mRNA surveillance pathway 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00062 Fatty acid elongation 9
ghi01040 Biosynthesis of unsaturated fatty acids 8
ghi01212 Fatty acid metabolism 8
ghi03040 Spliceosome 5
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 9
ghi00062 Fatty acid elongation 8
ghi01040 Biosynthesis of unsaturated fatty acids 7
ghi01212 Fatty acid metabolism 7
ghi03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821412 100778539 101262521 4329902 100282530 100250525 18107108 11437391 123144742 123127631 107886001 107924917 125608968 106451929 5728168 8072425 102585139 102627416 100837197 107813591 107812596
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