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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106447099   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ath-u.5   AT2G32730   26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 
 ath-u.5   AT1G04810   26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 
 gma-u.5   100817941   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 gma-u.5   100790425   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 vvi-u.5   100264792   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 vvi-u.5   100260616   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ppo-u.5   7496626   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 ppo-u.5   7461669   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 mtr-u.5   25486962   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 mtr-u.5   11407588   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sly-u.5   101261856   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 sly-u.5   101259750   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 osa-u.5   4336931   26S proteasome non-ATPase regulatory subunit 1 homolog A-like 
 osa-u.5   4344971   26S proteasome non-ATPase regulatory subunit 1 homolog A 
 zma-u.5   100382965   uncharacterized LOC100382965 
 zma-u.5   100274443   uncharacterized LOC100274443 
 zma-u.5   103645964   26S proteasome non-ATPase regulatory subunit 1 homolog A 

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Top 50 coexpressed genes to 106447099 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106447099 (bna-r.1 coexpression data)

CoexMap"106447099"


bnaLOC106447099 | Entrez gene ID : 106447099    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 2 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03050 [list] [network] Proteasome (219 genes)
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (172 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (494 genes)  IEA  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (13 genes)  IEA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (65 genes)  IEA  
GO:0000502 [list] [network] proteasome complex  (210 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0030234 [list] [network] enzyme regulator activity  (1622 genes)  IEA  
Protein XP_013744413.2 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 3,  E.R._plas 2,  extr 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_013744413.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_013744413.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106447099
ath-u.5
for
AT2G32730
ath-u.5
for
AT1G04810
gma-u.5
for
100817941
gma-u.5
for
100790425
vvi-u.5
for
100264792
vvi-u.5
for
100260616
ppo-u.5
for
7496626
ppo-u.5
for
7461669
mtr-u.5
for
25486962
mtr-u.5
for
11407588
sly-u.5
for
101261856
sly-u.5
for
101259750
osa-u.5
for
4336931
osa-u.5
for
4344971
zma-u.5
for
100382965
zma-u.5
for
100274443
zma-u.5
for
103645964


Ortholog ID: 3086
Species bna bna bra bra ath ath ghi ghi cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol LOC106387997 LOC106427681 LOC103857440 LOC103865226 AT2G32730 AT1G04810 LOC107887872 LOC107942918 LOC102615994 LOC100817941 LOC100790425 LOC100260616 LOC100264792 LOC7461669 LOC7496626 LOC25486962 LOC11407588 LOC101261856 LOC101259750 LOC102585142 LOC102586542 LOC107783497 LOC107804491 LOC4336931 LOC4344971 LOC100274443 LOC103645964 LOC123054362 LOC123046504 LOC123427666 LOC8063939 LOC8072167 LOC100835233 LOC100828654 CHLRE_17g727950v5
Function* 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A uncharacterized LOC100274443 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A-like 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A 26S proteasome non-ATPase regulatory subunit 1 homolog A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 12
bra04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 8
ath04141 Protein processing in endoplasmic reticulum 4
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 7
ath04141 Protein processing in endoplasmic reticulum 5
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 10
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 13
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03050 Proteasome 3
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
gma04141 Protein processing in endoplasmic reticulum 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 12
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo03050 Proteasome 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
ppo00566 Sulfoquinovose metabolism 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot03050 Proteasome 3
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 15
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03050 Proteasome 4
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu03050 Proteasome 3
hvu03060 Protein export 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03015 mRNA surveillance pathway 3
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
bdi04120 Ubiquitin mediated proteolysis 4
bdi03015 mRNA surveillance pathway 3
bdi04382 Cornified envelope formation 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387997 106427681 103857440 103865226 817833 839409 107887872 107942918 102615994 100817941 100790425 100260616 100264792 7461669 7496626 25486962 11407588 101261856 101259750 102585142 102586542 107783497 107804491 4336931 4344971 100274443 103645964 123054362 123046504 123427666 8063939 8072167 100835233 100828654 5722814
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