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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106450545   ribosome biogenesis protein NOP53-like 
 bna-r.1   106391593   ribosome biogenesis protein NOP53-like 
 bna-r.1   106391594   ribosome biogenesis protein NOP53-like 
 bna-r.1   106396951   ribosome biogenesis protein NOP53 
 bra-r.6   103866501   ribosome biogenesis protein NOP53 
 bra-r.6   103865796   ribosome biogenesis protein NOP53 
 ath-u.5   AT2G40430   Nop53 protein 
 ghi-r.1   107931849   ribosome biogenesis protein NOP53 
 ghi-r.1   107936367   ribosome biogenesis protein NOP53 
 cit-r.1   102627977   ribosome biogenesis protein NOP53 
 gma-u.5   100802185   ribosome biogenesis protein NOP53 
 gma-u.5   100797857   uncharacterized LOC100797857 
 vvi-u.5   100250159   ribosome biogenesis protein NOP53 
 ppo-u.5   7462110   ribosome biogenesis protein NOP53 
 mtr-u.5   11429503   ribosome biogenesis protein NOP53 
 sly-u.5   101265197   ribosome biogenesis protein NOP53 
 sot-r.1   102605382   uncharacterized protein At2g40430-like 
 sot-r.1   102584608   uncharacterized protein At2g40430-like 
 nta-r.1   107790236   ribosome biogenesis protein NOP53 
 nta-r.1   107805663   ribosome biogenesis protein NOP53 
 osa-u.5   4337783   ribosome biogenesis protein NOP53 
 zma-u.5   100282095   uncharacterized LOC100282095 
 tae-r.2   123180399   ribosome biogenesis protein NOP53 
 tae-r.2   123111285   ribosome biogenesis protein NOP53 
 tae-r.2   123190882   ribosome biogenesis protein NOP53 
 hvu-r.1   123424489   ribosome biogenesis protein NOP53 
 sbi-r.1   8075956   uncharacterized protein At2g40430 
 bdi-r.1   100834313   ribosome biogenesis protein NOP53 
 cre-r.1   CHLRE_07g348250v5   uncharacterized protein 

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Top 50 coexpressed genes to 106450545 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106450545 (bna-r.1 coexpression data)

CoexMap"106450545"


bnaLOC106450545 | Entrez gene ID : 106450545    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 2 1 1 1 1 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (108 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
GO:0008097 [list] [network] 5S rRNA binding  (41 genes)  IEA  
Protein XP_013747679.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_013747679.2)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for XP_013747679.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106450545
bna-r.1
for
106391593
bna-r.1
for
106391594
bna-r.1
for
106396951
bra-r.6
for
103866501
bra-r.6
for
103865796
ath-u.5
for
AT2G40430
ghi-r.1
for
107931849
ghi-r.1
for
107936367
cit-r.1
for
102627977
gma-u.5
for
100802185
gma-u.5
for
100797857
vvi-u.5
for
100250159
ppo-u.5
for
7462110
mtr-u.5
for
11429503
sly-u.5
for
101265197
sot-r.1
for
102605382
sot-r.1
for
102584608
nta-r.1
for
107790236
nta-r.1
for
107805663
osa-u.5
for
4337783
zma-u.5
for
100282095
tae-r.2
for
123180399
tae-r.2
for
123111285
tae-r.2
for
123190882
hvu-r.1
for
123424489
sbi-r.1
for
8075956
bdi-r.1
for
100834313
cre-r.1
for
CHLRE_07g348250v5


Ortholog ID: 7958
Species bna bna bna bra bra ath ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106391593 LOC106391594 LOC106396951 LOC103866501 LOC103865796 AT2G40430 LOC107931849 LOC107936367 LOC102627977 LOC100802185 LOC100797857 LOC100250159 LOC7462110 LOC11429503 LOC101265197 LOC102605382 LOC102584608 LOC107790236 LOC107805663 LOC4337783 LOC100282095 LOC123180399 LOC123111285 LOC123190882 LOC123424489 LOC8075956 LOC100834313 CHLRE_07g348250v5
Function* ribosome biogenesis protein NOP53-like ribosome biogenesis protein NOP53-like ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 Nop53 protein ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 uncharacterized LOC100797857 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 uncharacterized protein At2g40430-like uncharacterized protein At2g40430-like ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 uncharacterized LOC100282095 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 ribosome biogenesis protein NOP53 uncharacterized protein At2g40430 ribosome biogenesis protein NOP53 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 3
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106391593 106391594 106396951 103866501 103865796 818636 107931849 107936367 102627977 100802185 100797857 100250159 7462110 11429503 101265197 102605382 102584608 107790236 107805663 4337783 100282095 123180399 123111285 123190882 123424489 8075956 100834313 5718156
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