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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4340185   protein HEADING DATE 3A-like 
 osa-u.5   107276195   protein VERNALIZATION 3 
 osa-u.5   4324585   protein FLOWERING LOCUS T 1 
 tae-r.2   123162402   protein HEADING DATE 3A 
 hvu-r.1   123403951   protein FLOWERING LOCUS T-like 
 hvu-r.1   123409685   protein HEADING DATE 3A 
 bdi-r.1   100831221   protein HEADING DATE 3A 
 zma-u.5   100127524   uncharacterized LOC100127524 
 sbi-r.1   8073696   protein FLOWERING LOCUS T 
 sbi-r.1   8079504   protein RICE FLOWERING LOCUS T 1 
 ath-u.5   FT   PEBP (phosphatidylethanolamine-binding protein) family protein 
 gma-u.5   FT2A   protein FLOWERING LOCUS T 
 bra-r.6   103852241   protein FLOWERING LOCUS T 
 bra-r.6   103831057   protein TWIN SISTER of FT 
 ppo-u.5   7472463   protein HEADING DATE 3A 
 ghi-r.1   107928282   protein HEADING DATE 3A 
 ghi-r.1   107909115   protein HEADING DATE 3A 
 bna-r.1   111207300   protein FLOWERING LOCUS T 
 bna-r.1   111213971   protein FLOWERING LOCUS T 
 bna-r.1   106426212   protein TWIN SISTER of FT 
 sot-r.1   102606326   protein FLOWERING LOCUS T-like 
 sot-r.1   FT   flowering locus T protein 
 cit-r.1   102607363   protein HEADING DATE 3A-like 
 cit-r.1   102616595   protein HEADING DATE 3A-like 
 cit-r.1   102607069   protein HEADING DATE 3A-like 

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Top 50 coexpressed genes to 4340185 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4340185 (osa-u.5 coexpression data)

CoexMap""


osaLOC107280190 | Entrez gene ID : 107280190    
Species osa tae hvu bdi zma sbi ath gma bra ppo ghi bna sot cit nta mtr sly cre vvi
Paralog 3 1 2 1 1 2 1 1 2 1 2 3 2 3 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function protein VERNALIZATION 3-like
KEGG osa04712 [list] [network] Circadian rhythm - plant (47 genes)
GO BP
GO CC
GO MF
Protein XP_015627229.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  extr 2,  cyto_nucl 2  (predict for XP_015627229.1)
Subcellular
localization
TargetP
other 5  (predict for XP_015627229.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4340185
osa-u.5
for
107276195
osa-u.5
for
4324585
tae-r.2
for
123162402
hvu-r.1
for
123403951
hvu-r.1
for
123409685
bdi-r.1
for
100831221
zma-u.5
for
100127524
sbi-r.1
for
8073696
sbi-r.1
for
8079504
ath-u.5
for
FT
gma-u.5
for
FT2A
bra-r.6
for
103852241
bra-r.6
for
103831057
ppo-u.5
for
7472463
ghi-r.1
for
107928282
ghi-r.1
for
107909115
bna-r.1
for
111207300
bna-r.1
for
111213971
bna-r.1
for
106426212
sot-r.1
for
102606326
sot-r.1
for
FT
cit-r.1
for
102607363
cit-r.1
for
102616595
cit-r.1
for
102607069

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Ortholog ID: 1154
Species osa tae tae hvu hvu bdi zma zma sbi sbi sbi ath gma gma bra bra ppo ghi ghi bna bna bna sot sot cit cit cit
Symbol LOC107276195 LOC123162402 LOC123069202 LOC123403951 LOC123409685 LOC100838275 LOC100127524 ZCN14 LOC8073696 LOC8079504 LOC8069174 FT FT2A FT5A LOC103852241 LOC103831057 LOC7472463 LOC107928282 LOC107909115 LOC111207300 LOC111213971 LOC106426212 FT LOC102605989 LOC102607363 LOC102616595 LOC102607069
Function* protein VERNALIZATION 3 protein HEADING DATE 3A protein RICE FLOWERING LOCUS T 1 protein FLOWERING LOCUS T-like protein HEADING DATE 3A protein HEADING DATE 3A uncharacterized LOC100127524 ZCN14 protein protein FLOWERING LOCUS T protein RICE FLOWERING LOCUS T 1 protein HEADING DATE 3A PEBP (phosphatidylethanolamine-binding protein) family protein protein FLOWERING LOCUS T protein FLOWERING LOCUS T protein FLOWERING LOCUS T protein TWIN SISTER of FT protein HEADING DATE 3A protein HEADING DATE 3A protein HEADING DATE 3A protein FLOWERING LOCUS T protein FLOWERING LOCUS T protein TWIN SISTER of FT flowering locus T protein protein FLOWERING LOCUS T-like protein HEADING DATE 3A-like protein HEADING DATE 3A-like protein HEADING DATE 3A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 4
tae00511 Other glycan degradation 2
tae00600 Sphingolipid metabolism 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00999 Biosynthesis of various plant secondary metabolites 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 3
ghi00040 Pentose and glucuronate interconversions 2
ghi04712 Circadian rhythm - plant 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi04712 Circadian rhythm - plant 2
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107276195 123162402 123069202 123403951 123409685 100838275 100127524 100127523 8073696 8079504 8069174 842859 100814951 100796994 103852241 103831057 7472463 107928282 107909115 111207300 111213971 106426212 102577452 102605989 102607363 102616595 102607069
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