ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107760898	uncharacterized LOC107760898
nta-r.1	107814060	uncharacterized LOC107814060
nta-r.1	107785407	uncharacterized LOC107785407
nta-r.1	107780832	uncharacterized LOC107780832
sly-u.5	101260476	uncharacterized LOC101260476
sly-u.5	101256851	uncharacterized LOC101256851
sot-r.1	102604983	uncharacterized LOC102604983
sot-r.1	102590304	uncharacterized LOC102590304
sot-r.1	102579763	uncharacterized LOC102579763
ath-u.5	AT3G23510	Cyclopropane-fatty-acyl-phospholipid synthase
ath-u.5	AT3G23530	Cyclopropane-fatty-acyl-phospholipid synthase
gma-u.5	100801659	tuberculostearic acid methyltransferase UfaA1
gma-u.5	100815937	tuberculostearic acid methyltransferase UfaA1
bra-r.6	103860003	uncharacterized LOC103860003
bra-r.6	103828731	uncharacterized LOC103828731
bra-r.6	103828740	uncharacterized LOC103828740
vvi-u.5	100249441	uncharacterized LOC100249441
vvi-u.5	100242555	uncharacterized LOC100242555
ppo-u.5	7459982	uncharacterized LOC7459982
ppo-u.5	7473472	sphingolipid C9-methyltransferase 2
mtr-u.5	25484389	uncharacterized LOC25484389
ghi-r.1	107944247	tuberculostearic acid methyltransferase UfaA1
ghi-r.1	107930318	uncharacterized LOC107930318
ghi-r.1	107929039	uncharacterized LOC107929039
bna-r.1	106389661	uncharacterized LOC106389661
bna-r.1	106357875	uncharacterized LOC106357875
bna-r.1	106357883	uncharacterized LOC106357883
cit-r.1	102612222	uncharacterized LOC102612222
cit-r.1	102615883	uncharacterized LOC102615883
cit-r.1	102611924	uncharacterized LOC102611924
osa-u.5	4343210	uncharacterized LOC4343210
osa-u.5	4351940	uncharacterized LOC4351940
zma-u.5	103643302	Cyclopropane-fatty-acyl-phospholipid synthase
zma-u.5	103652693	Cyclopropane-fatty-acyl-phospholipid synthase
zma-u.5	100281392	cyclopropane fatty acid synthase
tae-r.2	123043294	uncharacterized LOC123043294
tae-r.2	123055102	uncharacterized LOC123055102
tae-r.2	123172247	uncharacterized LOC123172247
hvu-r.1	123424456	uncharacterized LOC123424456
hvu-r.1	123428431	uncharacterized LOC123428431
sbi-r.1	8070246	uncharacterized LOC8070246
sbi-r.1	8085994	uncharacterized LOC8085994
bdi-r.1	100842201	uncharacterized LOC100842201
bdi-r.1	112268524	uncharacterized LOC112268524
cre-r.1	CHLRE_06g281250v5	uncharacterized protein

Top 50 coexpressed genes to 107760898 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107760898 (nta-r.1 coexpression data)

CoexMap"107760898"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008168 [list] [network] methyltransferase activity	(581 genes)	IEA
GO:0016491 [list] [network] oxidoreductase activity	(2531 genes)	IEA

Protein

XP_016434503.1 [sequence] [blastp]
XP_016434504.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 2, nucl 1, cysk_plas 1, plas 1, cysk 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_016434503.1)
chlo 4, cyto 2, nucl 1, cysk_plas 1, plas 1, cysk 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_016434504.1)

Subcellular
localization
TargetP

scret 7	(predict for XP_016434503.1)
scret 7	(predict for XP_016434504.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107760898	nta-r.1 for 107814060	nta-r.1 for 107785407	nta-r.1 for 107780832	sly-u.5 for 101260476	sly-u.5 for 101256851	sot-r.1 for 102604983	sot-r.1 for 102590304	sot-r.1 for 102579763	ath-u.5 for AT3G23510	ath-u.5 for AT3G23530	gma-u.5 for 100801659	gma-u.5 for 100815937	bra-r.6 for 103860003	bra-r.6 for 103828731	bra-r.6 for 103828740	vvi-u.5 for 100249441	vvi-u.5 for 100242555	ppo-u.5 for 7459982	ppo-u.5 for 7473472	mtr-u.5 for 25484389	ghi-r.1 for 107944247	ghi-r.1 for 107930318	ghi-r.1 for 107929039	bna-r.1 for 106389661	bna-r.1 for 106357875	bna-r.1 for 106357883	cit-r.1 for 102612222	cit-r.1 for 102615883	cit-r.1 for 102611924	osa-u.5 for 4343210	osa-u.5 for 4351940	zma-u.5 for 103643302	zma-u.5 for 103652693	zma-u.5 for 100281392	tae-r.2 for 123043294	tae-r.2 for 123055102	tae-r.2 for 123172247	hvu-r.1 for 123424456	hvu-r.1 for 123428431	sbi-r.1 for 8070246	sbi-r.1 for 8085994	bdi-r.1 for 100842201	bdi-r.1 for 112268524	cre-r.1 for CHLRE_06g281250v5

Ortholog

Ortholog ID: 2475

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107760898

uncharacterized LOC107765268

uncharacterized LOC142178960

uncharacterized LOC101260476

uncharacterized LOC101256851

uncharacterized LOC102604983

uncharacterized LOC102590304

uncharacterized LOC102579763

Cyclopropane-fatty-acyl-phospholipid synthase

tuberculostearic acid methyltransferase UfaA1

uncharacterized LOC103860003

uncharacterized LOC103828740

uncharacterized LOC103828879

uncharacterized LOC100249441

uncharacterized LOC100242555

uncharacterized LOC7459982

sphingolipid C9-methyltransferase 2

uncharacterized LOC25484389

tuberculostearic acid methyltransferase UfaA1

uncharacterized LOC107930318

uncharacterized LOC107929039

uncharacterized LOC106357875

uncharacterized LOC106357883

uncharacterized LOC106435679

uncharacterized LOC102612222

uncharacterized LOC102615883

uncharacterized LOC102611924

uncharacterized LOC4343210

uncharacterized LOC4351940

Cyclopropane-fatty-acyl-phospholipid synthase

cyclopropane fatty acid synthase

uncharacterized LOC123043294

uncharacterized LOC123172247

uncharacterized LOC123187115

uncharacterized LOC8070246

uncharacterized LOC8085994

uncharacterized LOC100842201

uncharacterized LOC112268524

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00760	Nicotinate and nicotinamide metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	5
ath00260	Glycine, serine and threonine metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	3
ath00261	Monobactam biosynthesis	2
ath00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00904	Diterpenoid biosynthesis	2
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	3
bra01212	Fatty acid metabolism	3
bra04136	Autophagy - other	2
bra00240	Pyrimidine metabolism	2
bra00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	4
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107760898

107765268

142178960

101260476

101256851

102604983

102590304

102579763

821931

821932

100801659

100815937

103860003

103828740

103828879

100249441

100242555

7459982

7473472

25484389

107944247

107930318

107929039

106357875

106357883

106435679

102612222

102615883

102611924

4343210

4351940

103643302

103652693

100281392

123043294

123172247

123187115

8070246

8085994

100842201

112268524

5720925

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Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	3	2	2	1	3	3	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107760898 (nta-r.1 coexpression data)

Top 50 enrichment test to 107760898 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**