ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107762516	uncharacterized LOC107762516
nta-r.1	107806280	uncharacterized LOC107806280
sly-u.5	101258878	uncharacterized LOC101258878
sot-r.1	102583187	WD repeat-containing protein 75
ath-u.5	AT2G18900	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100807740	WD repeat-containing protein 75
gma-u.5	100777699	WD repeat-containing protein 75
bra-r.6	103828358	WD repeat-containing protein 75
vvi-u.5	100258308	uncharacterized LOC100258308
ppo-u.5	7488959	uncharacterized LOC7488959
ppo-u.5	18100484	uncharacterized LOC18100484
mtr-u.5	11438240	WD repeat-containing protein 75
ghi-r.1	107958675	WD repeat-containing protein 75
ghi-r.1	107907492	WD repeat-containing protein 75
bna-r.1	106433002	WD repeat-containing protein 75-like
bna-r.1	106375352	WD repeat-containing protein 75
bna-r.1	106357636	WD repeat-containing protein 75
cit-r.1	102613363	uncharacterized LOC102613363
osa-u.5	4352760	uncharacterized LOC4352760
zma-u.5	100383022	Transducin/WD40 repeat-like superfamily protein
tae-r.2	123119421	WD repeat-containing protein 75
tae-r.2	123110417	WD repeat-containing protein 75
tae-r.2	123102240	WD repeat-containing protein 75
hvu-r.1	123452779	WD repeat-containing protein 75
sbi-r.1	8070134	WD repeat-containing protein 75
bdi-r.1	100846037	WD repeat-containing protein 75
cre-r.1	CHLRE_04g215350v5	uncharacterized protein

Annotation

functional annotation

KEGG

nta03008 [list] [network] Ribosome biogenesis in eukaryotes (157 genes)

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7685 genes)

IEA

Protein

XP_016436362.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, cyto 1, pero 1, cyto_pero 1

(predict for XP_016436362.1)

Subcellular
localization
TargetP

chlo 3, mito 3

(predict for XP_016436362.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107762516	nta-r.1 for 107806280	sly-u.5 for 101258878	sot-r.1 for 102583187	ath-u.5 for AT2G18900	gma-u.5 for 100807740	gma-u.5 for 100777699	bra-r.6 for 103828358	vvi-u.5 for 100258308	ppo-u.5 for 7488959	ppo-u.5 for 18100484	mtr-u.5 for 11438240	ghi-r.1 for 107958675	ghi-r.1 for 107907492	bna-r.1 for 106433002	bna-r.1 for 106375352	bna-r.1 for 106357636	cit-r.1 for 102613363	osa-u.5 for 4352760	zma-u.5 for 100383022	tae-r.2 for 123119421	tae-r.2 for 123110417	tae-r.2 for 123102240	hvu-r.1 for 123452779	sbi-r.1 for 8070134	bdi-r.1 for 100846037	cre-r.1 for CHLRE_04g215350v5

Ortholog

Ortholog ID: 7508

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107762516

uncharacterized LOC107806280

uncharacterized LOC101258878

WD repeat-containing protein 75

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 75

uncharacterized LOC100258308

uncharacterized LOC7488959

uncharacterized LOC18100484

WD repeat-containing protein 75

WD repeat-containing protein 75-like

uncharacterized LOC102613363

uncharacterized LOC4352760

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 75

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	7
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	6
ppo03013	Nucleocytoplasmic transport	5
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	6
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	8
ghi00970	Aminoacyl-tRNA biosynthesis	4
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00770	Pantothenate and CoA biosynthesis	2
ghi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00430	Taurine and hypotaurine metabolism	2
bna00460	Cyanoamino acid metabolism	2
bna00480	Glutathione metabolism	2
bna00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	7
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	7
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	10
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	8
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	4

Expression

Expression pattern

Entrez Gene ID^*

107762516

107806280

101258878

102583187

816406

100807740

100777699

103828358

100258308

7488959

18100484

11438240

107958675

107907492

106375352

106357636

125605205

102613363

4352760

100383022

123119421

123110417

123102240

123452779

8070134

100846037

5724265

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107762516 (nta-r.1 coexpression data)

Top 50 enrichment test to 107762516 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	1	2	1	1	2	1	2	3	1	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107762516 (nta-r.1 coexpression data)

Top 50 enrichment test to 107762516 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**