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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107767304   putative 20S rRNA accumulation protein 4 
 nta-r.1   107825312   putative 20S rRNA accumulation protein 4 
 sly-u.5   101256671   probable 20S rRNA accumulation protein 4 
 ath-u.5   AT5G64830   programmed cell death 2 C-terminal domain-containing protein 
 gma-u.5   100796380   programmed cell death protein 2-like 
 bra-r.6   103873911   probable 20S rRNA accumulation protein 4 
 vvi-u.5   100255896   uncharacterized LOC100255896 
 ppo-u.5   7456264   uncharacterized LOC7456264 
 mtr-u.5   11421689   programmed cell death protein 2-like 
 ghi-r.1   107948411   programmed cell death protein 2-like 
 ghi-r.1   107897635   programmed cell death protein 2-like 
 bna-r.1   106375589   programmed cell death protein 2-like 
 bna-r.1   106375588   probable 20S rRNA accumulation protein 4 
 cit-r.1   102621855   uncharacterized LOC102621855 
 osa-u.5   4337167   uncharacterized LOC4337167 
 zma-u.5   100384606   uncharacterized LOC100384606 
 tae-r.2   123190837   programmed cell death protein 2-like 
 tae-r.2   123054986   programmed cell death protein 2-like 
 tae-r.2   123042496   programmed cell death protein 2-like 
 hvu-r.1   123428207   programmed cell death protein 2-like 
 sbi-r.1   8079559   programmed cell death protein 2-like 
 bdi-r.1   100825255   programmed cell death protein 2-like 
 cre-r.1   CHLRE_14g608500v5   uncharacterized protein 

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Top 50 coexpressed genes to 107767304 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107767304 (nta-r.1 coexpression data)

CoexMap"107767304"


ntaLOC107767304 | Entrez gene ID : 107767304      
Species nta sly ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre sot
Paralog 2 1 1 1 1 1 1 1 2 2 1 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
Protein XP_016441754.1 [sequence] [blastp]
XP_016441755.1 [sequence] [blastp]
XP_016441756.1 [sequence] [blastp]
XP_075084399.1 [sequence] [blastp]
XP_075084400.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  nucl 1  (predict for XP_016441754.1)
cysk 8,  nucl 1  (predict for XP_016441755.1)
cysk 8,  nucl 1  (predict for XP_016441756.1)
cysk 8,  nucl 1  (predict for XP_075084399.1)
cysk 8,  nucl 1  (predict for XP_075084400.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016441754.1)
other 9  (predict for XP_016441755.1)
other 9  (predict for XP_016441756.1)
other 9  (predict for XP_075084399.1)
other 9  (predict for XP_075084400.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107767304
nta-r.1
for
107825312
sly-u.5
for
101256671
ath-u.5
for
AT5G64830
gma-u.5
for
100796380
bra-r.6
for
103873911
vvi-u.5
for
100255896
ppo-u.5
for
7456264
mtr-u.5
for
11421689
ghi-r.1
for
107948411
ghi-r.1
for
107897635
bna-r.1
for
106375589
bna-r.1
for
106375588
cit-r.1
for
102621855
osa-u.5
for
4337167
zma-u.5
for
100384606
tae-r.2
for
123190837
tae-r.2
for
123054986
tae-r.2
for
123042496
hvu-r.1
for
123428207
sbi-r.1
for
8079559
bdi-r.1
for
100825255
cre-r.1
for
CHLRE_14g608500v5


Ortholog ID: 9752
Species nta nta sly ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107767304 LOC107825312 LOC101256671 AT5G64830 LOC100796380 LOC103873911 LOC100255896 LOC7456264 LOC11421689 LOC107948411 LOC107897635 LOC106375589 LOC106375588 LOC102621855 LOC4337167 LOC100384606 LOC123190837 LOC123054986 LOC123042496 LOC123428207 LOC8079559 LOC100825255 CHLRE_14g608500v5
Function* putative 20S rRNA accumulation protein 4 putative 20S rRNA accumulation protein 4 probable 20S rRNA accumulation protein 4 programmed cell death 2 C-terminal domain-containing protein programmed cell death protein 2-like probable 20S rRNA accumulation protein 4 uncharacterized LOC100255896 uncharacterized LOC7456264 programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like probable 20S rRNA accumulation protein 4 uncharacterized LOC102621855 uncharacterized LOC4337167 uncharacterized LOC100384606 programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like programmed cell death protein 2-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107767304 107825312 101256671 836606 100796380 103873911 100255896 7456264 11421689 107948411 107897635 106375589 106375588 102621855 4337167 100384606 123190837 123054986 123042496 123428207 8079559 100825255 66056133
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