ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107771855	protein SEMI-ROLLED LEAF 2
nta-r.1	107772297	protein SEMI-ROLLED LEAF 2-like
nta-r.1	107774580	protein SEMI-ROLLED LEAF 2
nta-r.1	107785681	protein SEMI-ROLLED LEAF 2
sly-u.5	101246912	protein SEMI-ROLLED LEAF 2
sly-u.5	101250362	protein SEMI-ROLLED LEAF 2
sly-u.5	101249679	protein SEMI-ROLLED LEAF 2-like
sot-r.1	102580046	uncharacterized LOC102580046
sot-r.1	102581977	protein EFR3 homolog B
sot-r.1	102584417	uncharacterized LOC102584417
ath-u.5	AT2G41830	Uncharacterized protein
ath-u.5	AT5G26850	Uncharacterized protein
gma-u.5	100811354	protein SEMI-ROLLED LEAF 2
gma-u.5	100808352	protein SEMI-ROLLED LEAF 2
gma-u.5	100806860	protein SEMI-ROLLED LEAF 2
bra-r.6	103849280	protein SEMI-ROLLED LEAF 2
bra-r.6	103865904	protein SEMI-ROLLED LEAF 2
bra-r.6	103866591	protein SEMI-ROLLED LEAF 2
vvi-u.5	100255472	protein SEMI-ROLLED LEAF 2
vvi-u.5	100264644	protein SEMI-ROLLED LEAF 2
vvi-u.5	100265428	protein SEMI-ROLLED LEAF 2
ppo-u.5	7478898	protein SEMI-ROLLED LEAF 2
ppo-u.5	7468978	protein SEMI-ROLLED LEAF 2
ppo-u.5	7473624	protein SEMI-ROLLED LEAF 2
mtr-u.5	11432930	protein SEMI-ROLLED LEAF 2
mtr-u.5	25484694	protein SEMI-ROLLED LEAF 2
ghi-r.1	107957174	protein SEMI-ROLLED LEAF 2
ghi-r.1	107890536	protein SEMI-ROLLED LEAF 2
ghi-r.1	107896942	protein SEMI-ROLLED LEAF 2
bna-r.1	125577192	protein SEMI-ROLLED LEAF 2-like
bna-r.1	106401862	protein SEMI-ROLLED LEAF 2
bna-r.1	106391677	protein SEMI-ROLLED LEAF 2
cit-r.1	102624456	protein SEMI-ROLLED LEAF 2
osa-u.5	4325109	protein SEMI-ROLLED LEAF 2-like
osa-u.5	4330920	protein SEMI-ROLLED LEAF 2-like
osa-u.5	4332616	protein SEMI-ROLLED LEAF 2-like
zma-u.5	103626409	ARM repeat superfamily protein
zma-u.5	100384293	uncharacterized LOC100384293
zma-u.5	100279714	uncharacterized LOC100279714
tae-r.2	123167736	protein SEMI-ROLLED LEAF 2
tae-r.2	123148624	protein SEMI-ROLLED LEAF 2
tae-r.2	123085674	protein SEMI-ROLLED LEAF 2
hvu-r.1	123404311	protein SEMI-ROLLED LEAF 2-like
hvu-r.1	123448818	protein SEMI-ROLLED LEAF 2
hvu-r.1	123445055	protein SEMI-ROLLED LEAF 2
sbi-r.1	8056112	uncharacterized LOC8056112
sbi-r.1	8081076	uncharacterized LOC8081076
bdi-r.1	100821184	uncharacterized LOC100821184
bdi-r.1	100821314	uncharacterized LOC100821314
bdi-r.1	100831072	uncharacterized LOC100831072
cre-r.1	CHLRE_01g024950v5	uncharacterized protein

Top 50 coexpressed genes to 107771855 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107771855 (nta-r.1 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

protein SEMI-ROLLED LEAF 2

KEGG

GO BP

GO CC

GO MF

Protein

XP_016446802.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 4, nucl 1, mito 1, plas 1, extr 1, nucl_plas 1, mito_plas 1

(predict for XP_016446802.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_016446802.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107771855	nta-r.1 for 107772297	nta-r.1 for 107774580	nta-r.1 for 107785681	sly-u.5 for 101246912	sly-u.5 for 101250362	sly-u.5 for 101249679	sot-r.1 for 102580046	sot-r.1 for 102581977	sot-r.1 for 102584417	ath-u.5 for AT2G41830	ath-u.5 for AT5G26850	gma-u.5 for 100811354	gma-u.5 for 100808352	gma-u.5 for 100806860	bra-r.6 for 103849280	bra-r.6 for 103865904	bra-r.6 for 103866591	vvi-u.5 for 100255472	vvi-u.5 for 100264644	vvi-u.5 for 100265428	ppo-u.5 for 7478898	ppo-u.5 for 7468978	ppo-u.5 for 7473624	mtr-u.5 for 11432930	mtr-u.5 for 25484694	ghi-r.1 for 107957174	ghi-r.1 for 107890536	ghi-r.1 for 107896942	bna-r.1 for 125577192	bna-r.1 for 106401862	bna-r.1 for 106391677	cit-r.1 for 102624456	osa-u.5 for 4325109	osa-u.5 for 4330920	osa-u.5 for 4332616	zma-u.5 for 103626409	zma-u.5 for 100384293	zma-u.5 for 100279714	tae-r.2 for 123167736	tae-r.2 for 123148624	tae-r.2 for 123085674	hvu-r.1 for 123404311	hvu-r.1 for 123448818	hvu-r.1 for 123445055	sbi-r.1 for 8056112	sbi-r.1 for 8081076	bdi-r.1 for 100821184	bdi-r.1 for 100821314	bdi-r.1 for 100831072	cre-r.1 for CHLRE_01g024950v5

Please wait a moment.

Ortholog

Ortholog ID: 601

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

protein SEMI-ROLLED LEAF 2

uncharacterized LOC102580046

uncharacterized LOC102584417

protein EFR3 homolog B-like

Uncharacterized protein

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

uncharacterized LOC100384293

ARM repeat superfamily protein

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

protein SEMI-ROLLED LEAF 2

protein SEMI-ROLLED LEAF 2-like

uncharacterized LOC8056112

uncharacterized LOC8069959

uncharacterized LOC100821314

uncharacterized LOC100831072

uncharacterized LOC100842021

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00562	Inositol phosphate metabolism	3
ath04070	Phosphatidylinositol signaling system	3
ath04144	Endocytosis	3
ath04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	3
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	4
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00010	Glycolysis / Gluconeogenesis	2
cre00030	Pentose phosphate pathway	2
cre00051	Fructose and mannose metabolism	2
cre00052	Galactose metabolism	2
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107774580

107809856

107781178

101250362

101249679

101249681

102580046

102584417

102584593

818782

832743

100811354

100799047

100808778

103849280

103865904

100264644

100265428

100264846

7478898

7468978

7469592

25484694

107943168

107945754

107886341

106401862

106395475

125585177

102614635

102623618

4332616

4328275

100384293

100381825

103634777

123145763

123128630

123097671

123404311

123445055

123410976

8056112

8069959

100821314

100831072

100842021

5715271

The preparation time of this page was 0.4 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	3	3	3	2	3	3	1	3	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107771855 (nta-r.1 coexpression data)

Top 50 enrichment test to 107771855 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**