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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107777466   photosystem II 5 kDa protein, chloroplastic-like 
 nta-r.1   107780887   photosystem II 5 kDa protein, chloroplastic 
 nta-r.1   107811505   photosystem II 5 kDa protein, chloroplastic-like 
 nta-r.1   107787201   photosystem II 5 kDa protein, chloroplastic-like 
 sly-u.5   101258049   photosystem II 5 kDa protein, chloroplastic 
 sly-u.5   101255525   photosystem II 5 kDa protein, chloroplastic-like 
 sot-r.1   102588469   photosystem II 5 kDa protein, chloroplastic-like 
 sot-r.1   102602387   photosystem II 5 kDa protein, chloroplastic 
 ath-u.5   PSBTN   photosystem II subunit T 
 gma-u.5   100527666   photosystem II reaction center subunit T-like protein 
 gma-u.5   100795035   photosystem II 5 kDa protein, chloroplastic 
 gma-u.5   100305919   putative photosystem II subunit T 
 bra-r.6   103859882   photosystem II 5 kDa protein, chloroplastic 
 bra-r.6   103869213   photosystem II 5 kDa protein, chloroplastic 
 bra-r.6   103871288   photosystem II 5 kDa protein, chloroplastic 
 vvi-u.5   100265352   photosystem II 5 kDa protein, chloroplastic-like 
 ppo-u.5   7467372   photosystem II 5 kDa protein, chloroplastic 
 ppo-u.5   18095071   photosystem II 5 kDa protein, chloroplastic 
 mtr-u.5   11419625   photosystem II 5 kDa protein, chloroplastic 
 mtr-u.5   11438275   photosystem II 5 kDa protein, chloroplastic 
 mtr-u.5   25491952   photosystem II 5 kDa protein, chloroplastic 
 bna-r.1   106451880   photosystem II 5 kDa protein, chloroplastic 
 bna-r.1   106424465   photosystem II 5 kDa protein, chloroplastic-like 
 bna-r.1   106406634   photosystem II 5 kDa protein, chloroplastic-like 
 cit-r.1   102606725   photosystem II 5 kDa protein, chloroplastic 
 cit-r.1   102614461   photosystem II 5 kDa protein, chloroplastic-like 
 osa-u.5   4329783   photosystem II 5 kDa protein, chloroplastic 
 zma-u.5   100276652   uncharacterized LOC100276652 
 tae-r.2   123136041   photosystem II 5 kDa protein, chloroplastic 
 tae-r.2   123131996   photosystem II 5 kDa protein, chloroplastic 
 tae-r.2   123143521   photosystem II 5 kDa protein, chloroplastic 
 hvu-r.1   123402174   photosystem II 5 kDa protein, chloroplastic-like 
 sbi-r.1   8070565   photosystem II 5 kDa protein, chloroplastic 
 bdi-r.1   100842975   photosystem II 5 kDa protein, chloroplastic 

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Top 50 coexpressed genes to 107777466 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107777466 (nta-r.1 coexpression data)

CoexMap"107777466"


ntaLOC107777466 | Entrez gene ID : 107777466      
Species nta sly sot ath gma bra vvi ppo mtr bna cit osa zma tae hvu sbi bdi cre ghi
Paralog 4 2 2 1 3 3 1 2 3 3 2 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016452979.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_016452979.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016452979.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107777466
nta-r.1
for
107780887
nta-r.1
for
107811505
nta-r.1
for
107787201
sly-u.5
for
101258049
sly-u.5
for
101255525
sot-r.1
for
102588469
sot-r.1
for
102602387
ath-u.5
for
PSBTN
gma-u.5
for
100527666
gma-u.5
for
100795035
gma-u.5
for
100305919
bra-r.6
for
103859882
bra-r.6
for
103869213
bra-r.6
for
103871288
vvi-u.5
for
100265352
ppo-u.5
for
7467372
ppo-u.5
for
18095071
mtr-u.5
for
11419625
mtr-u.5
for
11438275
mtr-u.5
for
25491952
bna-r.1
for
106451880
bna-r.1
for
106424465
bna-r.1
for
106406634
cit-r.1
for
102606725
cit-r.1
for
102614461
osa-u.5
for
4329783
zma-u.5
for
100276652
tae-r.2
for
123136041
tae-r.2
for
123131996
tae-r.2
for
123143521
hvu-r.1
for
123402174
sbi-r.1
for
8070565
bdi-r.1
for
100842975


Ortholog ID: 3463
Species nta nta nta sly sly sot sot ath gma gma gma bra bra bra vvi ppo ppo mtr mtr mtr bna bna bna cit cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107780887 LOC107780888 LOC142164297 LOC101258049 LOC101255525 LOC102588469 LOC102602387 PSBTN LOC100527666 LOC100795035 LOC100306374 LOC103859882 LOC103869213 LOC103871288 LOC100265352 LOC7467372 LOC18095071 LOC11419625 LOC11438275 LOC25491952 LOC106424465 LOC106346066 LOC106389357 LOC102606725 LOC102614461 LOC4329783 LOC100276652 LOC123136041 LOC123131996 LOC123143521 LOC123402174 LOC8070565 LOC100842975
Function* photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic photosystem II subunit T photosystem II reaction center subunit T-like protein photosystem II 5 kDa protein, chloroplastic putative photosystem II 5 KD protein photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic uncharacterized LOC100276652 photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic-like photosystem II 5 kDa protein, chloroplastic photosystem II 5 kDa protein, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 9
nta01200 Carbon metabolism 9
nta00630 Glyoxylate and dicarboxylate metabolism 7
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 13
nta01200 Carbon metabolism 13
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 8
nta01200 Carbon metabolism 8
nta00630 Glyoxylate and dicarboxylate metabolism 6
nta00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 12
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 14
sly03040 Spliceosome 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 15
sot03040 Spliceosome 4
sot04144 Endocytosis 4
sot03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 16
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 7
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 12
bra00190 Oxidative phosphorylation 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 10
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 7
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 15
ppo00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 13
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 8
bna00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 9
tae00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 7
hvu00196 Photosynthesis - antenna proteins 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 9
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107780887 107780888 142164297 101258049 101255525 102588469 102602387 821657 100527666 100795035 100306374 103859882 103869213 103871288 100265352 7467372 18095071 11419625 11438275 25491952 106424465 106346066 106389357 102606725 102614461 4329783 100276652 123136041 123131996 123143521 123402174 8070565 100842975
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