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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107778400   large ribosomal subunit protein uL6m-like 
 nta-r.1   107804677   large ribosomal subunit protein uL6m 
 sly-u.5   101259499   large ribosomal subunit protein uL6m 
 sot-r.1   102578705   60S ribosomal protein L6, mitochondrial 
 ath-u.5   AT2G18400   ribosomal protein L6 family protein 
 gma-u.5   100811303   60S ribosomal protein L6, mitochondrial-like 
 gma-u.5   100780944   60S ribosomal protein L6, mitochondrial 
 gma-u.5   100527168   60S ribosomal protein L6 
 bra-r.6   108872165   60S ribosomal protein L6, mitochondrial 
 bra-r.6   108869037   60S ribosomal protein L6, mitochondrial 
 vvi-u.5   100247870   large ribosomal subunit protein uL6m 
 ppo-u.5   7480126   60S ribosomal protein L6, mitochondrial 
 mtr-u.5   25484554   60S ribosomal protein L6, mitochondrial 
 mtr-u.5   25484820   60S ribosomal protein L6, mitochondrial 
 ghi-r.1   107943819   60S ribosomal protein L6, mitochondrial 
 ghi-r.1   107890501   60S ribosomal protein L6, mitochondrial 
 bna-r.1   106348193   60S ribosomal protein L6, mitochondrial-like 
 bna-r.1   106432753   60S ribosomal protein L6, mitochondrial 
 bna-r.1   106384855   60S ribosomal protein L6, mitochondrial-like 
 cit-r.1   102620510   60S ribosomal protein L6, mitochondrial 
 cit-r.1   127900364   60S ribosomal protein L6, mitochondrial-like 
 osa-u.5   4333960   large ribosomal subunit protein uL6m 
 osa-u.5   9269245   large ribosomal subunit protein uL6m 
 zma-u.5   100304027   60S ribosomal protein L6, mitochondrial-like 
 tae-r.2   123090928   60S ribosomal protein L6, mitochondrial 
 tae-r.2   123095961   60S ribosomal protein L6, mitochondrial 
 hvu-r.1   123401616   60S ribosomal protein L6, mitochondrial-like 
 hvu-r.1   123447629   60S ribosomal protein L6, mitochondrial-like 
 sbi-r.1   8054402   60S ribosomal protein L6, mitochondrial 
 sbi-r.1   8076048   60S ribosomal protein L6, mitochondrial 
 bdi-r.1   100838346   60S ribosomal protein L6, mitochondrial 
 bdi-r.1   106866832   60S ribosomal protein L6, mitochondrial 

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Top 50 coexpressed genes to 107778400 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107778400 (nta-r.1 coexpression data)

CoexMap"107778400"


ntaLOC107778400 | Entrez gene ID : 107778400    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 3 2 1 1 2 2 3 2 2 1 2 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03010 [list] [network] Ribosome (765 genes)
GO BP
GO:0006412 [list] [network] translation  (1013 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (734 genes)  IEA  
GO MF
GO:0019843 [list] [network] rRNA binding  (147 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (725 genes)  IEA  
Protein XP_016454140.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  plas 1,  nucl 1,  mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_016454140.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_016454140.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107778400
nta-r.1
for
107804677
sly-u.5
for
101259499
sot-r.1
for
102578705
ath-u.5
for
AT2G18400
gma-u.5
for
100811303
gma-u.5
for
100780944
gma-u.5
for
100527168
bra-r.6
for
108872165
bra-r.6
for
108869037
vvi-u.5
for
100247870
ppo-u.5
for
7480126
mtr-u.5
for
25484554
mtr-u.5
for
25484820
ghi-r.1
for
107943819
ghi-r.1
for
107890501
bna-r.1
for
106348193
bna-r.1
for
106432753
bna-r.1
for
106384855
cit-r.1
for
102620510
cit-r.1
for
127900364
osa-u.5
for
4333960
osa-u.5
for
9269245
zma-u.5
for
100304027
tae-r.2
for
123090928
tae-r.2
for
123095961
hvu-r.1
for
123401616
hvu-r.1
for
123447629
sbi-r.1
for
8054402
sbi-r.1
for
8076048
bdi-r.1
for
100838346
bdi-r.1
for
106866832


Ortholog ID: 4862
Species nta nta sly sot ath gma gma gma bra bra vvi ppo mtr mtr ghi ghi bna bna bna cit cit osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107778400 LOC107804677 LOC101259499 LOC102578705 AT2G18400 LOC100811303 LOC100780944 LOC100527168 LOC108872165 LOC108869037 LOC100247870 LOC7480126 LOC25484554 LOC25484820 LOC107943819 LOC107890501 LOC106348193 LOC106384855 LOC106357718 LOC102620510 LOC127900364 LOC4333960 LOC9269245 LOC100304027 LOC123095961 LOC123128349 LOC123138198 LOC123401616 LOC123447629 LOC8054402 LOC8076048 LOC100838346 LOC106866832
Function* large ribosomal subunit protein uL6m-like large ribosomal subunit protein uL6m large ribosomal subunit protein uL6m 60S ribosomal protein L6, mitochondrial ribosomal protein L6 family protein 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial large ribosomal subunit protein uL6m 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial-like large ribosomal subunit protein uL6m large ribosomal subunit protein uL6m 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial-like 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial 60S ribosomal protein L6, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma03010 Ribosome 2
gma00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi03010 Ribosome 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi03010 Ribosome 4
ghi03022 Basal transcription factors 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03013 Nucleocytoplasmic transport 3
bdi01230 Biosynthesis of amino acids 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107778400 107804677 101259499 102578705 816355 100811303 100780944 100527168 108872165 108869037 100247870 7480126 25484554 25484820 107943819 107890501 106348193 106384855 106357718 102620510 127900364 4333960 9269245 100304027 123095961 123128349 123138198 123401616 123447629 8054402 8076048 100838346 106866832
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