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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107779754   peptidyl-prolyl cis-trans isomerase CYP40-like 
 sly-u.5   101249415   peptidyl-prolyl cis-trans isomerase CYP40-like 
 sly-u.5   101244531   peptidyl-prolyl cis-trans isomerase CYP40-like 
 ath-u.5   SQN   peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase 
 gma-u.5   CYP16   peptidyl-prolyl cis-trans isomerase CYP16 
 gma-u.5   CYP9   peptidyl-prolyl cis-trans isomerase CYP9 
 gma-u.5   CYP17   peptidyl-prolyl cis-trans isomerase CYP17 
 vvi-u.5   100262316   peptidyl-prolyl cis-trans isomerase CYP40 
 ppo-u.5   7489721   peptidyl-prolyl cis-trans isomerase CYP40 
 ppo-u.5   7490009   peptidyl-prolyl cis-trans isomerase CYP40 
 mtr-u.5   11445101   peptidyl-prolyl cis-trans isomerase CYP40 
 mtr-u.5   11411252   peptidyl-prolyl cis-trans isomerase CYP40 
 osa-u.5   4330806   peptidyl-prolyl cis-trans isomerase CYP40 
 osa-u.5   4340493   peptidyl-prolyl cis-trans isomerase CYP40 
 zma-u.5   100383555   Peptidyl-prolyl cis-trans isomerase CYP40 

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Top 50 coexpressed genes to 107779754 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107779754 (nta-r.1 coexpression data)

CoexMap"107779754"


ntaLOC107779754 | Entrez gene ID : 107779754    
Species nta sly ath gma vvi ppo mtr osa zma sbi bra cre hvu cit bdi sot tae bna ghi
Paralog 1 2 1 3 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (59 genes)  IEA  
GO:0006457 [list] [network] protein folding  (306 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0016018 [list] [network] cyclosporin A binding  (27 genes)  IEA  
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (120 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016455722.1 [sequence] [blastp]
XP_016455723.1 [sequence] [blastp]
XP_016455724.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1  (predict for XP_016455722.1)
nucl 6,  cyto 1,  mito 1  (predict for XP_016455723.1)
nucl 6,  cyto 1,  mito 1  (predict for XP_016455724.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016455722.1)
other 9  (predict for XP_016455723.1)
other 9  (predict for XP_016455724.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107779754

.
sly-u.5
for
101249415

.
sly-u.5
for
101244531

.
ath-u.5
for
SQN

.
gma-u.5
for
CYP16

.
gma-u.5
for
CYP9

.
gma-u.5
for
CYP17

.
vvi-u.5
for
100262316

.
ppo-u.5
for
7489721

.
ppo-u.5
for
7490009

.
mtr-u.5
for
11445101

.
mtr-u.5
for
11411252

.
osa-u.5
for
4330806

.
osa-u.5
for
4340493

.
zma-u.5
for
100383555

.


Ortholog ID: 3191
Species ath gma gma sly sly osa osa zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol SQN CYP9 CYP17 LOC101244531 LOC101249415 LOC4340493 LOC4330806 LOC100383555 LOC103844346 LOC100262316 LOC18097822 LOC7489721 LOC11411252 LOC11445101 LOC123149587 LOC123157280 LOC123401001 LOC123407508 LOC121209628 LOC107914312 LOC125590281 LOC125590283 CHLRE_01g047700v5 LOC8078906 LOC8070780 LOC102589477 LOC102601132 LOC102610492 LOC100846893 LOC100838905 LOC107771402 LOC107780505
Function* peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase peptidyl-prolyl cis-trans isomerase CYP9 peptidyl-prolyl cis-trans isomerase CYP17 peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 Peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40-like uncharacterized protein peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40 peptidyl-prolyl cis-trans isomerase CYP40-like peptidyl-prolyl cis-trans isomerase CYP40-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 4
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 7
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04626 Plant-pathogen interaction 4
mtr03040 Spliceosome 3
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04070 Phosphatidylinositol signaling system 2
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 8
cre03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04626 Plant-pathogen interaction 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 3
nta00500 Starch and sucrose metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816074 100805889 100804110 101244531 101249415 4340493 4330806 100383555 103844346 100262316 18097822 7489721 11411252 11445101 123149587 123157280 123401001 123407508 121209628 107914312 125590281 125590283 5715689 8078906 8070780 102589477 102601132 102610492 100846893 100838905 107771402 107780505
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