ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107818491	uncharacterized LOC107818491
nta-r.1	107769833	uncharacterized LOC107769833
sly-u.5	101251365	vacuolar protein sorting-associated protein IST1
sot-r.1	102602559	uncharacterized LOC102602559
sot-r.1	102595108	uncharacterized LOC102595108
ath-u.5	AT1G79910	Regulator of Vps4 activity in the MVB pathway protein
ath-u.5	AT1G52315	Regulator of Vps4 activity in the MVB pathway protein
gma-u.5	100775349	uncharacterized LOC100775349
gma-u.5	100812444	uncharacterized LOC100812444
gma-u.5	100820462	uncharacterized LOC100820462
vvi-u.5	100251435	uncharacterized LOC100251435
vvi-u.5	104880647	uncharacterized LOC104880647
ppo-u.5	7473036	uncharacterized LOC7473036
ppo-u.5	18107618	uncharacterized LOC18107618
mtr-u.5	11409191	IST1-like protein
mtr-u.5	25496909	uncharacterized LOC25496909
mtr-u.5	11409615	uncharacterized LOC11409615
ghi-r.1	107930858	uncharacterized LOC107930858
ghi-r.1	107933008	polycomb group protein FERTILIZATION-INDEPENDENT SEED 2
ghi-r.1	107901225	uncharacterized LOC107901225
cit-r.1	102616577	uncharacterized LOC102616577
osa-u.5	4328370	uncharacterized LOC4328370
osa-u.5	9271691	uncharacterized LOC9271691
zma-u.5	103628194	uncharacterized LOC103628194
zma-u.5	100383750	uncharacterized LOC100383750
tae-r.2	123136410	uncharacterized LOC123136410
tae-r.2	123132358	uncharacterized LOC123132358
hvu-r.1	123401050	uncharacterized LOC123401050
sbi-r.1	8074661	uncharacterized LOC8074661
bdi-r.1	100832711	uncharacterized LOC100832711
bdi-r.1	100836034	uncharacterized LOC100836034

Annotation

functional annotation

KEGG

GO BP

GO:0015031 [list] [network] protein transport

(680 genes)

IEA

GO CC

GO MF

Protein

XP_016460661.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 2, mito 1

(predict for XP_016460661.2)

Subcellular
localization
TargetP

other 9

(predict for XP_016460661.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107818491	nta-r.1 for 107769833	sly-u.5 for 101251365	sot-r.1 for 102602559	sot-r.1 for 102595108	ath-u.5 for AT1G79910	ath-u.5 for AT1G52315	gma-u.5 for 100775349	gma-u.5 for 100812444	gma-u.5 for 100820462	vvi-u.5 for 100251435	vvi-u.5 for 104880647	ppo-u.5 for 7473036	ppo-u.5 for 18107618	mtr-u.5 for 11409191	mtr-u.5 for 25496909	mtr-u.5 for 11409615	ghi-r.1 for 107930858	ghi-r.1 for 107933008	ghi-r.1 for 107901225	cit-r.1 for 102616577	osa-u.5 for 4328370	osa-u.5 for 9271691	zma-u.5 for 103628194	zma-u.5 for 100383750	tae-r.2 for 123136410	tae-r.2 for 123132358	hvu-r.1 for 123401050	sbi-r.1 for 8074661	bdi-r.1 for 100832711	bdi-r.1 for 100836034

Ortholog

Ortholog ID: 1999

Species

nta

sly

sot

ath

vvi

ppo

mtr

ghi

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107796377

uncharacterized LOC107814461

vacuolar protein sorting-associated protein IST1

uncharacterized LOC102602559

uncharacterized LOC102595108

uncharacterized LOC102596878

Regulator of Vps4 activity in the MVB pathway protein

uncharacterized LOC100251435

uncharacterized LOC104880647

uncharacterized LOC7473036

uncharacterized LOC18107618

IST1-like protein

uncharacterized LOC25496909

uncharacterized LOC11432045

polycomb group protein FERTILIZATION-INDEPENDENT SEED 2

uncharacterized LOC107901225

uncharacterized LOC107949590

uncharacterized LOC102616577

uncharacterized LOC4328370

uncharacterized LOC9271691

uncharacterized LOC103628194

uncharacterized LOC100383750

uncharacterized LOC123168835

uncharacterized LOC123401050

uncharacterized LOC8074661

uncharacterized LOC100832711

uncharacterized LOC100836034

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	4
sot04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2
ath00062	Fatty acid elongation	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	3
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	6
ghi00250	Alanine, aspartate and glutamate metabolism	6
ghi00910	Nitrogen metabolism	6
ghi01200	Carbon metabolism	6
ghi00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	3
zma01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

107796377

107814461

101251365

102602559

102595108

102596878

844330

2745821

100251435

104880647

7473036

18107618

11409191

25496909

11432045

107933008

107901225

107949590

102616577

4328370

9271691

103628194

100383750

123168835

123401050

8074661

100832711

100836034

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107818491 (nta-r.1 coexpression data)

Top 50 enrichment test to 107818491 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	vvi	ppo	mtr	ghi	cit	osa	zma	tae	hvu	sbi	bdi	bra	bna	cre
Paralog	2	1	2	2	3	2	2	3	3	1	2	2	2	1	1	2	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107818491 (nta-r.1 coexpression data)

Top 50 enrichment test to 107818491 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**