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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107784672   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 nta-r.1   107800133   protein DEFECTIVE IN MERISTEM SILENCING 3 
 nta-r.1   107784268   protein DEFECTIVE IN MERISTEM SILENCING 3 
 nta-r.1   107778612   protein DEFECTIVE IN MERISTEM SILENCING 3 
 sly-u.5   101258444   protein DEFECTIVE IN MERISTEM SILENCING 3 
 sot-r.1   102602167   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 sot-r.1   102601162   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 ath-u.5   DMS3   defective in meristem silencing 3 
 gma-u.5   100809510   protein DEFECTIVE IN MERISTEM SILENCING 3 
 gma-u.5   100794789   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bra-r.6   103873495   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bra-r.6   103873078   protein DEFECTIVE IN MERISTEM SILENCING 3 
 vvi-u.5   100257134   protein DEFECTIVE IN MERISTEM SILENCING 3 
 ppo-u.5   7464545   protein DEFECTIVE IN MERISTEM SILENCING 3 
 ppo-u.5   7457401   protein DEFECTIVE IN MERISTEM SILENCING 3 
 mtr-u.5   25491126   protein DEFECTIVE IN MERISTEM SILENCING 3 
 mtr-u.5   25499765   protein DEFECTIVE IN MERISTEM SILENCING 3 
 ghi-r.1   107947241   protein DEFECTIVE IN MERISTEM SILENCING 3 
 ghi-r.1   107929614   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bna-r.1   106347429   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bna-r.1   106357681   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bna-r.1   106429845   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 cit-r.1   102630961   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 osa-u.5   4327777   protein DEFECTIVE IN MERISTEM SILENCING 3 
 zma-u.5   100193778   uncharacterized LOC100193778 
 zma-u.5   109945948   protein DEFECTIVE IN MERISTEM SILENCING 3 
 tae-r.2   123069401   protein DEFECTIVE IN MERISTEM SILENCING 3 
 tae-r.2   123056862   protein DEFECTIVE IN MERISTEM SILENCING 3 
 hvu-r.1   123443283   protein DEFECTIVE IN MERISTEM SILENCING 3-like 
 sbi-r.1   8078089   protein DEFECTIVE IN MERISTEM SILENCING 3 
 bdi-r.1   100843338   protein DEFECTIVE IN MERISTEM SILENCING 3 

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Top 50 coexpressed genes to 107784672 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107784672 (nta-r.1 coexpression data)

CoexMap"107784672"


ntaLOC107784672 | Entrez gene ID : 107784672      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 1 2 1 2 2 1 2 2 2 3 1 1 2 2 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016461314.1 [sequence] [blastp]
XP_016461315.1 [sequence] [blastp]
XP_016461316.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 3,  chlo 1,  nucl 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for XP_016461314.1)
cyto 4,  extr 2,  cyto_pero 2,  cyto_plas 2  (predict for XP_016461315.1)
chlo 4,  mito 3,  cyto_mito 2,  nucl 1  (predict for XP_016461316.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016461314.1)
other 8  (predict for XP_016461315.1)
mito 8  (predict for XP_016461316.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107784672
nta-r.1
for
107800133
nta-r.1
for
107784268
nta-r.1
for
107778612
sly-u.5
for
101258444
sot-r.1
for
102602167
sot-r.1
for
102601162
ath-u.5
for
DMS3
gma-u.5
for
100809510
gma-u.5
for
100794789
bra-r.6
for
103873495
bra-r.6
for
103873078
vvi-u.5
for
100257134
ppo-u.5
for
7464545
ppo-u.5
for
7457401
mtr-u.5
for
25491126
mtr-u.5
for
25499765
ghi-r.1
for
107947241
ghi-r.1
for
107929614
bna-r.1
for
106347429
bna-r.1
for
106357681
bna-r.1
for
106429845
cit-r.1
for
102630961
osa-u.5
for
4327777
zma-u.5
for
100193778
zma-u.5
for
109945948
tae-r.2
for
123069401
tae-r.2
for
123056862
hvu-r.1
for
123443283
sbi-r.1
for
8078089
bdi-r.1
for
100843338


Ortholog ID: 5324
Species nta nta nta sly sly sot sot ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna bna cit osa zma zma tae tae hvu sbi bdi
Symbol LOC107800133 LOC107784268 LOC107778612 LOC101258444 LOC101244960 LOC102602167 LOC102601162 DMS3 LOC100809510 LOC100794789 LOC103873495 LOC103873078 LOC100257134 LOC7464545 LOC7457401 LOC25491126 LOC25499765 LOC107947241 LOC107929614 LOC106347429 LOC106429845 LOC106397208 LOC102630961 LOC4327777 LOC100193778 LOC109945948 LOC123069401 LOC123056862 LOC123443283 LOC8078089 LOC100843338
Function* protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3-like protein DEFECTIVE IN MERISTEM SILENCING 3-like defective in meristem silencing 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3-like protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3-like protein DEFECTIVE IN MERISTEM SILENCING 3 uncharacterized LOC100193778 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3-like protein DEFECTIVE IN MERISTEM SILENCING 3 protein DEFECTIVE IN MERISTEM SILENCING 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00061 Fatty acid biosynthesis 4
bra01212 Fatty acid metabolism 4
bra00780 Biotin metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
bna03020 RNA polymerase 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae00510 N-Glycan biosynthesis 3
tae00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 10
tae00513 Various types of N-glycan biosynthesis 10
tae04141 Protein processing in endoplasmic reticulum 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu00510 N-Glycan biosynthesis 3
hvu00513 Various types of N-glycan biosynthesis 3
hvu04712 Circadian rhythm - plant 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107800133 107784268 107778612 101258444 101244960 102602167 102601162 824086 100809510 100794789 103873495 103873078 100257134 7464545 7457401 25491126 25499765 107947241 107929614 106347429 106429845 106397208 102630961 4327777 100193778 109945948 123069401 123056862 123443283 8078089 100843338
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