ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107787082	protein VAC14 homolog
nta-r.1	107830866	protein VAC14 homolog
nta-r.1	107774252	protein VAC14 homolog
nta-r.1	107823476	protein VAC14 homolog
sly-u.5	101261230	protein VAC14 homolog
sly-u.5	101265122	protein VAC14 homolog
sot-r.1	102579235	protein VAC14 homolog
sot-r.1	102606383	protein VAC14 homolog
ath-u.5	AT2G01690	ARM repeat superfamily protein
gma-u.5	100813929	protein VAC14 homolog
gma-u.5	100812004	protein VAC14 homolog
gma-u.5	100791693	protein VAC14 homolog
bra-r.6	103827560	protein VAC14 homolog
bra-r.6	103839468	protein VAC14 homolog
bra-r.6	103854048	protein VAC14 homolog
vvi-u.5	100243898	protein VAC14 homolog
ppo-u.5	7482912	protein VAC14 homolog
ppo-u.5	7462674	protein VAC14 homolog
mtr-u.5	25482523	protein VAC14 homolog
mtr-u.5	11407584	protein VAC14 homolog
ghi-r.1	107955707	protein VAC14 homolog
ghi-r.1	107922251	protein VAC14 homolog
ghi-r.1	107918115	protein VAC14 homolog
bna-r.1	125578294	protein VAC14 homolog
bna-r.1	106389115	protein VAC14 homolog
bna-r.1	106401288	protein VAC14 homolog
cit-r.1	102628881	protein VAC14 homolog
osa-u.5	4332109	protein VAC14 homolog
zma-u.5	100216573	uncharacterized LOC100216573
zma-u.5	100381815	uncharacterized LOC100381815
tae-r.2	123092923	protein VAC14 homolog
tae-r.2	123085133	protein VAC14 homolog
tae-r.2	123098201	protein VAC14 homolog
hvu-r.1	123449273	protein VAC14 homolog
sbi-r.1	8085276	protein VAC14 homolog
bdi-r.1	100824122	protein VAC14 homolog
cre-r.1	CHLRE_16g670261v5	uncharacterized protein

Top 50 coexpressed genes to 107787082 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107787082 (nta-r.1 coexpression data)

CoexMap"107787082"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006661 [list] [network] phosphatidylinositol biosynthetic process

(113 genes)

IEA

GO CC

GO:0070772 [list] [network] PAS complex	(6 genes)	IEA
GO:0010008 [list] [network] endosome membrane	(96 genes)	IEA

GO MF

Protein

XP_075101337.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 2, nucl 1

(predict for XP_075101337.1)

Subcellular
localization
TargetP

other 5

(predict for XP_075101337.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107787082	nta-r.1 for 107830866	nta-r.1 for 107774252	nta-r.1 for 107823476	sly-u.5 for 101261230	sly-u.5 for 101265122	sot-r.1 for 102579235	sot-r.1 for 102606383	ath-u.5 for AT2G01690	gma-u.5 for 100813929	gma-u.5 for 100812004	gma-u.5 for 100791693	bra-r.6 for 103827560	bra-r.6 for 103839468	bra-r.6 for 103854048	vvi-u.5 for 100243898	ppo-u.5 for 7482912	ppo-u.5 for 7462674	mtr-u.5 for 25482523	mtr-u.5 for 11407584	ghi-r.1 for 107955707	ghi-r.1 for 107922251	ghi-r.1 for 107918115	bna-r.1 for 125578294	bna-r.1 for 106389115	bna-r.1 for 106401288	cit-r.1 for 102628881	osa-u.5 for 4332109	zma-u.5 for 100216573	zma-u.5 for 100381815	tae-r.2 for 123092923	tae-r.2 for 123085133	tae-r.2 for 123098201	hvu-r.1 for 123449273	sbi-r.1 for 8085276	bdi-r.1 for 100824122	cre-r.1 for CHLRE_16g670261v5

Ortholog

Ortholog ID: 4032

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein VAC14 homolog

ARM repeat superfamily protein

protein VAC14 homolog

uncharacterized LOC100216573

uncharacterized LOC100381815

protein VAC14 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2
nta03450	Non-homologous end-joining	2
nta03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta03022	Basal transcription factors	2
nta02010	ABC transporters	2
nta04146	Peroxisome	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	4
sot04626	Plant-pathogen interaction	3
sot04382	Cornified envelope formation	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	4
gma00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04148	Efferocytosis	2
bra04144	Endocytosis	2
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra03015	mRNA surveillance pathway	2
bra04382	Cornified envelope formation	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03022	Basal transcription factors	2
mtr03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03015	mRNA surveillance pathway	2
ghi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	2
bna00410	beta-Alanine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	2
bna00410	beta-Alanine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	2
bna00410	beta-Alanine metabolism	2
bna00770	Pantothenate and CoA biosynthesis	2
bna00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	3
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	4
zma00562	Inositol phosphate metabolism	2
zma04070	Phosphatidylinositol signaling system	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	3
tae00230	Purine metabolism	2
tae01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	4
cre00510	N-Glycan biosynthesis	4
cre00513	Various types of N-glycan biosynthesis	4
cre04141	Protein processing in endoplasmic reticulum	4

Expression

Expression pattern

Entrez Gene ID^*

107787082

107774252

107766851

101261230

101265122

102579235

102606383

814698

100813929

100812004

100791693

103827560

103839468

103854048

100243898

7482912

7462674

25482523

11407584

107922251

107918115

121216002

125578294

106401288

106405979

102628881

4332109

100216573

100381815

123092923

123085133

123098201

123449273

8085276

100824122

5724771

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	1	3	3	1	2	2	3	3	1	1	2	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107787082 (nta-r.1 coexpression data)

Top 50 enrichment test to 107787082 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**