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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107787830   phosphoglycerate kinase, cytosolic 
 sly-u.5   101254111   phosphoglycerate kinase 
 sly-u.5   101253805   phosphoglycerate kinase, chloroplastic 
 ath-u.5   PGK1   phosphoglycerate kinase 1 
 ath-u.5   AT1G56190   Phosphoglycerate kinase family protein 
 ath-u.5   PGK   phosphoglycerate kinase 
 gma-u.5   100801951   putative phosphoglycerate kinase 
 gma-u.5   100802480   phosphoglycerate kinase, cytosolic 
 gma-u.5   100795933   phosphoglycerate kinase, cytosolic 
 vvi-u.5   100249576   phosphoglycerate kinase, chloroplastic-like 
 vvi-u.5   100244419   phosphoglycerate kinase, cytosolic-like 
 ppo-u.5   7460679   phosphoglycerate kinase, cytosolic 
 ppo-u.5   7496585   phosphoglycerate kinase, chloroplastic 
 ppo-u.5   7481598   phosphoglycerate kinase, chloroplastic 
 mtr-u.5   11441786   phosphoglycerate kinase, cytosolic 
 mtr-u.5   11424739   phosphoglycerate kinase, cytosolic 
 mtr-u.5   11421966   phosphoglycerate kinase 3, cytosolic 
 osa-u.5   4339204   phosphoglycerate kinase, chloroplastic 
 osa-u.5   4328435   phosphoglycerate kinase, cytosolic 
 zma-u.5   100274579   Phosphoglycerate kinase 
 zma-u.5   100281237   phosphoglycerate kinase 
 zma-u.5   103635817   phosphoglycerate kinase, chloroplastic 

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Top 50 coexpressed genes to 107787830 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107787830 (nta-r.1 coexpression data)

CoexMap"107787830"


ntaLOC107787830 | Entrez gene ID : 107787830    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 2 3 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00010 [list] [network] Glycolysis / Gluconeogenesis (270 genes)
nta00710 [list] [network] Carbon fixation by Calvin cycle (163 genes)
nta01200 [list] [network] Carbon metabolism (563 genes)
nta01230 [list] [network] Biosynthesis of amino acids (462 genes)
GO BP
GO:0006094 [list] [network] gluconeogenesis  (42 genes)  IEA  
GO:0006096 [list] [network] glycolytic process  (112 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1509 genes)  IEA  
GO MF
GO:0004618 [list] [network] phosphoglycerate kinase activity  (9 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (476 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein NP_001312375.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 3  (predict for NP_001312375.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001312375.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107787830
sly-u.5
for
101254111
sly-u.5
for
101253805
ath-u.5
for
PGK1
ath-u.5
for
AT1G56190
ath-u.5
for
PGK
gma-u.5
for
100801951
gma-u.5
for
100802480
gma-u.5
for
100795933
vvi-u.5
for
100249576
vvi-u.5
for
100244419
ppo-u.5
for
7460679
ppo-u.5
for
7496585
ppo-u.5
for
7481598
mtr-u.5
for
11441786
mtr-u.5
for
11424739
mtr-u.5
for
11421966
osa-u.5
for
4339204
osa-u.5
for
4328435
zma-u.5
for
100274579
zma-u.5
for
100281237
zma-u.5
for
103635817


Ortholog ID: 1540
Species nta nta sly sly sot sot ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107818768 LOC107811868 LOC101253805 LOC101254111 LOC102605730 LOC102577647 PGK AT1G56190 LOC100795933 LOC100796458 LOC103859466 LOC103870225 LOC100244419 LOC100249576 LOC7460679 LOC7492954 LOC11421966 LOC11441786 LOC107922181 LOC107917863 LOC106429698 LOC106430726 LOC102611457 LOC102611752 LOC4339204 LOC4341792 LOC103635817 LOC100274579 LOC543496 LOC123166750 LOC123443752 LOC123411329 LOC110435132 LOC110431217 LOC100822858 LOC100831948 CHLRE_11g467770v5
Function* phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, chloroplastic phosphoglycerate kinase phosphoglycerate kinase, chloroplastic-like phosphoglycerate kinase, chloroplastic phosphoglycerate kinase Phosphoglycerate kinase family protein phosphoglycerate kinase, cytosolic phosphoglycerate kinase phosphoglycerate kinase 1, chloroplastic phosphoglycerate kinase 1, chloroplastic phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, chloroplastic-like phosphoglycerate kinase, cytosolic phosphoglycerate kinase, cytosolic phosphoglycerate kinase 3, cytosolic phosphoglycerate kinase, cytosolic phosphoglycerate kinase, chloroplastic phosphoglycerate kinase, chloroplastic phosphoglycerate kinase 3, cytosolic phosphoglycerate kinase 3, cytosolic phosphoglycerate kinase, chloroplastic phosphoglycerate kinase, cytosolic phosphoglycerate kinase, chloroplastic phosphoglycerate kinase, cytosolic phosphoglycerate kinase, chloroplastic Phosphoglycerate kinase phosphoglycerate kinase, chloroplastic-like phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, chloroplastic phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, cytosolic-like phosphoglycerate kinase, cytosolic phosphoglycerate kinase, cytosolic phosphoglycerate kinase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 6
nta04141 Protein processing in endoplasmic reticulum 5
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 6
nta04141 Protein processing in endoplasmic reticulum 5
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly00260 Glycine, serine and threonine metabolism 3
sly00670 One carbon pool by folate 2
sly00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly00010 Glycolysis / Gluconeogenesis 6
sly01200 Carbon metabolism 6
sly00710 Carbon fixation by Calvin cycle 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00710 Carbon fixation by Calvin cycle 6
sot01230 Biosynthesis of amino acids 6
sot00195 Photosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00710 Carbon fixation by Calvin cycle 5
sot01200 Carbon metabolism 5
sot01230 Biosynthesis of amino acids 5
sot00195 Photosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 13
ath01230 Biosynthesis of amino acids 12
ath00010 Glycolysis / Gluconeogenesis 11
ath00710 Carbon fixation by Calvin cycle 5
ath00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00710 Carbon fixation by Calvin cycle 6
ath01230 Biosynthesis of amino acids 6
ath00010 Glycolysis / Gluconeogenesis 5
ath00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 15
gma00710 Carbon fixation by Calvin cycle 14
gma01230 Biosynthesis of amino acids 11
gma00010 Glycolysis / Gluconeogenesis 9
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 9
bra00710 Carbon fixation by Calvin cycle 7
bra00010 Glycolysis / Gluconeogenesis 5
bra01230 Biosynthesis of amino acids 5
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 11
bra01230 Biosynthesis of amino acids 9
bra00710 Carbon fixation by Calvin cycle 8
bra00010 Glycolysis / Gluconeogenesis 6
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 16
vvi01230 Biosynthesis of amino acids 12
vvi00010 Glycolysis / Gluconeogenesis 12
vvi00710 Carbon fixation by Calvin cycle 8
vvi00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00710 Carbon fixation by Calvin cycle 7
vvi00010 Glycolysis / Gluconeogenesis 4
vvi00030 Pentose phosphate pathway 3
vvi00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 10
ppo01200 Carbon metabolism 9
ppo01230 Biosynthesis of amino acids 9
ppo00710 Carbon fixation by Calvin cycle 6
ppo00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 13
ppo01200 Carbon metabolism 13
ppo01230 Biosynthesis of amino acids 13
ppo00710 Carbon fixation by Calvin cycle 9
ppo00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 3
mtr01230 Biosynthesis of amino acids 3
mtr00630 Glyoxylate and dicarboxylate metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 14
mtr00710 Carbon fixation by Calvin cycle 10
mtr00010 Glycolysis / Gluconeogenesis 10
mtr01230 Biosynthesis of amino acids 10
mtr00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 7
bna00710 Carbon fixation by Calvin cycle 7
bna01200 Carbon metabolism 7
bna01230 Biosynthesis of amino acids 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00195 Photosynthesis 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 10
cit00010 Glycolysis / Gluconeogenesis 9
cit01230 Biosynthesis of amino acids 9
cit00710 Carbon fixation by Calvin cycle 7
cit00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00710 Carbon fixation by Calvin cycle 3
osa01230 Biosynthesis of amino acids 3
osa00010 Glycolysis / Gluconeogenesis 2
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa01230 Biosynthesis of amino acids 10
osa00010 Glycolysis / Gluconeogenesis 10
osa00710 Carbon fixation by Calvin cycle 8
osa00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 17
zma01230 Biosynthesis of amino acids 14
zma00010 Glycolysis / Gluconeogenesis 13
zma00710 Carbon fixation by Calvin cycle 10
zma00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 11
tae01200 Carbon metabolism 9
tae01230 Biosynthesis of amino acids 9
tae00051 Fructose and mannose metabolism 5
tae00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu01230 Biosynthesis of amino acids 4
hvu00195 Photosynthesis 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 6
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 14
sbi01200 Carbon metabolism 14
sbi01230 Biosynthesis of amino acids 12
sbi00710 Carbon fixation by Calvin cycle 9
sbi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 13
sbi01200 Carbon metabolism 11
sbi01230 Biosynthesis of amino acids 10
sbi00710 Carbon fixation by Calvin cycle 8
sbi00350 Tyrosine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 13
bdi01200 Carbon metabolism 12
bdi00010 Glycolysis / Gluconeogenesis 10
bdi00710 Carbon fixation by Calvin cycle 7
bdi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 3
bdi01230 Biosynthesis of amino acids 3
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 7
cre00710 Carbon fixation by Calvin cycle 6
cre00010 Glycolysis / Gluconeogenesis 5
cre00195 Photosynthesis 5
cre00030 Pentose phosphate pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107818768 107811868 101253805 101254111 102605730 102577647 844293 842072 100795933 100796458 103859466 103870225 100244419 100249576 7460679 7492954 11421966 11441786 107922181 107917863 106429698 106430726 102611457 102611752 4339204 4341792 103635817 100274579 543496 123166750 123443752 123411329 110435132 110431217 100822858 100831948 5725034
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