ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107790033	hypothetical protein At1g04090
nta-r.1	107826901	hypothetical protein At1g04090-like
nta-r.1	107812490	hypothetical protein At1g04090-like
nta-r.1	107789599	hypothetical protein At1g04090
sly-u.5	101253331	hypothetical protein At1g04090
sly-u.5	101257692	hypothetical protein At1g04090-like
sly-u.5	101247062	hypothetical protein At1g04090
sot-r.1	102590400	uncharacterized LOC102590400
sot-r.1	102604240	uncharacterized LOC102604240
sot-r.1	102584466	uncharacterized LOC102584466
ath-u.5	AT2G44230	hypothetical protein (DUF946)
ath-u.5	AT5G43950	vacuolar protein sorting-associated protein (DUF946)
bra-r.6	103866778	uncharacterized LOC103866778
bra-r.6	103866129	uncharacterized LOC103866129
vvi-u.5	100263054	uncharacterized LOC100263054
vvi-u.5	100259944	hypothetical protein At1g04090
vvi-u.5	100242579	hypothetical protein At1g04090
ppo-u.5	7455698	hypothetical protein At1g04090
ppo-u.5	7488942	hypothetical protein At1g04090
mtr-u.5	11418595	uncharacterized LOC11418595
mtr-u.5	11421900	uncharacterized LOC11421900
mtr-u.5	11424791	uncharacterized LOC11424791
ghi-r.1	107936840	uncharacterized LOC107936840
ghi-r.1	107928743	uncharacterized LOC107928743
ghi-r.1	107924722	uncharacterized LOC107924722
bna-r.1	106442071	uncharacterized LOC106442071
bna-r.1	125580733	uncharacterized LOC125580733
cit-r.1	102609992	hypothetical protein At1g04090
cit-r.1	102613175	hypothetical protein At1g04090-like
osa-u.5	4331586	uncharacterized LOC4331586
osa-u.5	4343701	hypothetical protein At1g04090
osa-u.5	4333936	hypothetical protein At1g04090
zma-u.5	100278316	uncharacterized LOC100278316
zma-u.5	100278579	uncharacterized LOC100278579
zma-u.5	100502510	Vacuolar protein sorting-associated protein 62
tae-r.2	123093747	uncharacterized LOC123093747
tae-r.2	123044449	uncharacterized LOC123044449
hvu-r.1	123449858	uncharacterized LOC123449858
hvu-r.1	123429805	uncharacterized LOC123429805
hvu-r.1	123447575	uncharacterized LOC123447575
sbi-r.1	8055685	uncharacterized LOC8055685
sbi-r.1	8080581	uncharacterized LOC8080581
sbi-r.1	8059985	uncharacterized LOC8059985
bdi-r.1	100834654	uncharacterized LOC100834654
bdi-r.1	100822588	uncharacterized LOC100822588
bdi-r.1	104584083	uncharacterized LOC104584083
cre-r.1	CHLRE_10g437900v5	uncharacterized protein

Top 50 coexpressed genes to 107790033 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107790033 (nta-r.1 coexpression data)

CoexMap"107790033"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016467415.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, cyto_pero 3

(predict for XP_016467415.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016467415.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107790033	nta-r.1 for 107826901	nta-r.1 for 107812490	nta-r.1 for 107789599	sly-u.5 for 101253331	sly-u.5 for 101257692	sly-u.5 for 101247062	sot-r.1 for 102590400	sot-r.1 for 102604240	sot-r.1 for 102584466	ath-u.5 for AT2G44230	ath-u.5 for AT5G43950	bra-r.6 for 103866778	bra-r.6 for 103866129	vvi-u.5 for 100263054	vvi-u.5 for 100259944	vvi-u.5 for 100242579	ppo-u.5 for 7455698	ppo-u.5 for 7488942	mtr-u.5 for 11418595	mtr-u.5 for 11421900	mtr-u.5 for 11424791	ghi-r.1 for 107936840	ghi-r.1 for 107928743	ghi-r.1 for 107924722	bna-r.1 for 106442071	bna-r.1 for 125580733	cit-r.1 for 102609992	cit-r.1 for 102613175	osa-u.5 for 4331586	osa-u.5 for 4343701	osa-u.5 for 4333936	zma-u.5 for 100278316	zma-u.5 for 100278579	zma-u.5 for 100502510	tae-r.2 for 123093747	tae-r.2 for 123044449	hvu-r.1 for 123449858	hvu-r.1 for 123429805	hvu-r.1 for 123447575	sbi-r.1 for 8055685	sbi-r.1 for 8080581	sbi-r.1 for 8059985	bdi-r.1 for 100834654	bdi-r.1 for 100822588	bdi-r.1 for 104584083	cre-r.1 for CHLRE_10g437900v5

Ortholog

Ortholog ID: 502

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

hypothetical protein At1g04090

hypothetical protein At1g04090-like

hypothetical protein At1g04090

hypothetical protein At1g04090-like

hypothetical protein At1g04090

uncharacterized LOC102589484

uncharacterized LOC102585636

uncharacterized LOC102578745

hypothetical protein (DUF946)

uncharacterized LOC100806731

uncharacterized LOC100788778

uncharacterized LOC103866129

uncharacterized LOC103850048

uncharacterized LOC100263054

hypothetical protein At1g04090

uncharacterized LOC11424791

uncharacterized LOC11445525

uncharacterized LOC107903520

uncharacterized LOC107961144

uncharacterized LOC107940869

uncharacterized LOC106429215

hypothetical protein At1g04090

hypothetical protein At1g04090-like

uncharacterized LOC4331586

hypothetical protein At1g04090

uncharacterized LOC100278316

uncharacterized LOC100278579

Vacuolar protein sorting-associated protein 62

uncharacterized LOC123044449

uncharacterized LOC123052310

uncharacterized LOC123098981

uncharacterized LOC123449858

uncharacterized LOC123429805

uncharacterized LOC123447575

uncharacterized LOC8055685

uncharacterized LOC8080581

uncharacterized LOC8059985

uncharacterized LOC100834654

uncharacterized LOC100822588

uncharacterized LOC104584083

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta03040	Spliceosome	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	8
nta00566	Sulfoquinovose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	3
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	7
sot00360	Phenylalanine metabolism	4
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma04130	SNARE interactions in vesicular transport	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	5
ppo00592	alpha-Linolenic acid metabolism	2
ppo00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi03015	mRNA surveillance pathway	2
ghi00061	Fatty acid biosynthesis	2
ghi00071	Fatty acid degradation	2
ghi01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma04141	Protein processing in endoplasmic reticulum	4
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	3
hvu01212	Fatty acid metabolism	3
hvu01200	Carbon metabolism	2
hvu04144	Endocytosis	2
hvu00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2
sbi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	4
bdi04626	Plant-pathogen interaction	4
bdi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04130	SNARE interactions in vesicular transport	2

Expression

Expression pattern

Entrez Gene ID^*

107789599

107792427

107803146

101247062

101265960

101256489

102589484

102585636

102578745

819031

100806731

100788778

103866129

103850048

100263054

100259944

100242579

7488942

112328607

11424791

11445525

107903520

107961144

107940869

106429215

102609992

102613175

4331586

4343701

4333936

100278316

100278579

100502510

123044449

123052310

123098981

123449858

123429805

123447575

8055685

8080581

8059985

100834654

100822588

104584083

5716070

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Species	nta	sly	sot	ath	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre	gma
Paralog	4	3	3	2	2	3	2	3	3	2	2	3	3	2	3	3	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107790033 (nta-r.1 coexpression data)

Top 50 enrichment test to 107790033 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**