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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790517   RING-H2 finger protein ATL46-like 
 nta-r.1   107766860   RING-H2 finger protein ATL46-like 
 nta-r.1   107773524   RING-H2 finger protein ATL46-like 
 nta-r.1   107795505   RING-H2 finger protein ATL46-like 
 sly-u.5   101256874   RING-H2 finger protein ATL47 
 sly-u.5   101260009   RING-H2 finger protein ATL46 
 sly-u.5   101247279   RING-H2 finger protein ATL46 
 sot-r.1   102585645   RING-H2 finger protein ATL46-like 
 sot-r.1   102589098   RING-H2 finger protein ATL46-like 
 sot-r.1   102584972   RING-H2 finger protein ATL47 
 ath-u.5   AT5G40250   RING/U-box superfamily protein 
 ath-u.5   AT1G23980   RING/U-box superfamily protein 
 gma-u.5   100794750   RING-H2 finger protein ATL47 
 gma-u.5   100805154   RING-H2 finger protein ATL47 
 gma-u.5   RFP1   RING-type E3 ubiquitin ligase 
 bra-r.6   103850167   RING-H2 finger protein ATL46 
 bra-r.6   103840719   RING-H2 finger protein ATL47 
 bra-r.6   103835644   RING-H2 finger protein ATL47 
 vvi-u.5   100253470   RING-H2 finger protein ATL46 
 vvi-u.5   104882287   RING-H2 finger protein ATL46 
 ppo-u.5   7483485   RING-H2 finger protein ATL46 
 ppo-u.5   7496654   RING-H2 finger protein ATL46 
 ppo-u.5   7457720   RING-H2 finger protein ATL46 
 mtr-u.5   25495206   RING-H2 finger protein ATL46 
 mtr-u.5   25501278   RING-H2 finger protein ATL47 
 mtr-u.5   11409570   RING-H2 finger protein ATL47 
 ghi-r.1   107892298   RING-H2 finger protein ATL46 
 ghi-r.1   107942722   RING-H2 finger protein ATL47 
 ghi-r.1   107909654   RING-H2 finger protein ATL47 
 bna-r.1   106446138   RING-H2 finger protein ATL46 
 cit-r.1   102610892   RING-H2 finger protein ATL46-like 
 cit-r.1   102628155   RING-H2 finger protein ATL47 
 cit-r.1   102630819   RING-H2 finger protein ATL46 
 osa-u.5   4340585   RING-H2 finger protein ATL46 
 osa-u.5   4340250   RING-H2 finger protein ATL46 
 osa-u.5   4330698   RING-H2 finger protein ATL46 
 zma-u.5   103627714   RING-H2 finger protein ATL46 
 zma-u.5   100304207   putative RING zinc finger domain superfamily protein 
 zma-u.5   100279788   uncharacterized LOC100279788 
 tae-r.2   123149852   RING-H2 finger protein ATL46 
 tae-r.2   123169642   RING-H2 finger protein ATL47 
 tae-r.2   123149460   RING-H2 finger protein ATL47 
 hvu-r.1   123409026   RING-H2 finger protein ATL46-like 
 hvu-r.1   123408790   RING-H2 finger protein ATL47-like 
 sbi-r.1   110431343   RING-H2 finger protein ATL46-like 
 sbi-r.1   8070900   RING-H2 finger protein ATL46 
 sbi-r.1   8075720   RING-H2 finger protein ATL46 
 bdi-r.1   100830087   RING-H2 finger protein ATL46 
 bdi-r.1   100842401   RING-H2 finger protein ATL46 

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Top 50 coexpressed genes to 107790517 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790517 (nta-r.1 coexpression data)

CoexMap"107790517"


ntaLOC107790517 | Entrez gene ID : 107790517      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 3 2 3 3 3 1 3 3 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (35 genes)  IEA  
Protein XP_016467936.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 4  (predict for XP_016467936.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016467936.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790517
nta-r.1
for
107766860
nta-r.1
for
107773524
nta-r.1
for
107795505
sly-u.5
for
101256874
sly-u.5
for
101260009
sly-u.5
for
101247279
sot-r.1
for
102585645
sot-r.1
for
102589098
sot-r.1
for
102584972
ath-u.5
for
AT5G40250
ath-u.5
for
AT1G23980
gma-u.5
for
100794750
gma-u.5
for
100805154
gma-u.5
for
RFP1
bra-r.6
for
103850167
bra-r.6
for
103840719
bra-r.6
for
103835644
vvi-u.5
for
100253470
vvi-u.5
for
104882287
ppo-u.5
for
7483485
ppo-u.5
for
7496654
ppo-u.5
for
7457720
mtr-u.5
for
25495206
mtr-u.5
for
25501278
mtr-u.5
for
11409570
ghi-r.1
for
107892298
ghi-r.1
for
107942722
ghi-r.1
for
107909654
bna-r.1
for
106446138
cit-r.1
for
102610892
cit-r.1
for
102628155
cit-r.1
for
102630819
osa-u.5
for
4340585
osa-u.5
for
4340250
osa-u.5
for
4330698
zma-u.5
for
103627714
zma-u.5
for
100304207
zma-u.5
for
100279788
tae-r.2
for
123149852
tae-r.2
for
123169642
tae-r.2
for
123149460
hvu-r.1
for
123409026
hvu-r.1
for
123408790
sbi-r.1
for
110431343
sbi-r.1
for
8070900
sbi-r.1
for
8075720
bdi-r.1
for
100830087
bdi-r.1
for
100842401


Ortholog ID: 1677
Species nta nta nta sly sly sly sot sot sot ath ath gma gma gma bra bra bra vvi vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC107766860 LOC107795505 LOC107798316 LOC101256874 LOC101247279 LOC101251870 LOC102585645 LOC102584972 LOC102587520 AT5G40250 AT1G23980 LOC100794750 LOC100805154 LOC100787206 LOC103850167 LOC103840719 LOC103863965 LOC100253470 LOC104882287 LOC7483485 LOC7457720 LOC25495206 LOC25501278 LOC11409570 LOC107942722 LOC107909654 LOC107958577 LOC106446138 LOC106352683 LOC106367584 LOC102610892 LOC102628155 LOC102630819 LOC4340585 LOC4340250 LOC4330698 LOC103627714 LOC100304207 LOC100192054 LOC123149852 LOC123169642 LOC123149460 LOC123409026 LOC123408790 LOC110431343 LOC8070900 LOC8075720 LOC100830087 LOC100842401
Function* RING-H2 finger protein ATL46-like RING-H2 finger protein ATL46-like RING-H2 finger protein ATL46-like RING-H2 finger protein ATL47 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46-like RING-H2 finger protein ATL46-like RING-H2 finger protein ATL47 RING-H2 finger protein ATL46-like RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL47 RING-H2 finger protein ATL47 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL47 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL47 RING-H2 finger protein ATL47 RING-H2 finger protein ATL47 RING-H2 finger protein ATL47 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46-like RING-H2 finger protein ATL47 RING-H2 finger protein ATL46-like RING-H2 finger protein ATL47 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein RING-H2 finger protein ATL46 RING-H2 finger protein ATL47 RING-H2 finger protein ATL47 RING-H2 finger protein ATL46-like RING-H2 finger protein ATL47-like RING-H2 finger protein ATL46-like RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46 RING-H2 finger protein ATL46
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
gma01212 Fatty acid metabolism 3
gma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
gma01212 Fatty acid metabolism 3
gma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00061 Fatty acid biosynthesis 3
bra00620 Pyruvate metabolism 3
bra01200 Carbon metabolism 3
bra00640 Propanoate metabolism 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 4
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 6
zma04145 Phagosome 5
zma04517 IgSF CAM signaling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04070 Phosphatidylinositol signaling system 3
sbi04075 Plant hormone signal transduction 3
sbi04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107766860 107795505 107798316 101256874 101247279 101251870 102585645 102584972 102587520 834023 839010 100794750 100805154 100787206 103850167 103840719 103863965 100253470 104882287 7483485 7457720 25495206 25501278 11409570 107942722 107909654 107958577 106446138 106352683 106367584 102610892 102628155 102630819 4340585 4340250 4330698 103627714 100304207 100192054 123149852 123169642 123149460 123409026 123408790 110431343 8070900 8075720 100830087 100842401
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