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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107791572   putative pectate lyase P59 
 nta-r.1   107761724   putative pectate lyase P59 
 nta-r.1   107772855   putative pectate lyase P59 
 sly-u.5   LAT59   pectate lyase P59 
 sly-u.5   101257960   pectate lyase-like 
 ath-u.5   AT2G02720   Pectate lyase family protein 
 ath-u.5   AT3G01270   Pectate lyase family protein 
 ath-u.5   AT5G15110   Pectate lyase family protein 
 gma-u.5   102664159   probable pectate lyase 3 
 gma-u.5   100780236   pectate lyase 
 vvi-u.5   100254377   pectate lyase 
 vvi-u.5   100262177   pectate lyase 
 ghi-r.1   107898714   probable pectate lyase P59 
 ghi-r.1   107919012   pectate lyase 
 bna-r.1   125580832   probable pectate lyase 7 
 bna-r.1   125594097   probable pectate lyase 19 
 cit-r.1   127898591   probable pectate lyase 19 
 cit-r.1   102621878   probable pectate lyase 19 
 osa-u.5   4340103   pectate lyase 
 osa-u.5   4340099   pectate lyase 
 zma-u.5   100284055   uncharacterized LOC100284055 
 zma-u.5   100284356   pectate lyase 
 zma-u.5   107275230   uncharacterized LOC107275230 
 tae-r.2   123136954   pectate lyase 
 tae-r.2   123127312   pectate lyase 
 tae-r.2   123144374   pectate lyase 

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Top 50 coexpressed genes to 107791572 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107791572 (nta-r.1 coexpression data)

CoexMap"107791572"


ntaLOC107791572 | Entrez gene ID : 107791572      
Species nta sly ath gma vvi ghi bna cit osa zma tae sbi sot mtr bra hvu ppo cre bdi
Paralog 3 2 3 2 2 2 2 2 2 3 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00040 [list] [network] Pentose and glucuronate interconversions (239 genes)
GO BP
GO CC
GO MF
GO:0030570 [list] [network] pectate lyase activity  (51 genes)  IEA  
Protein XP_016469146.2 [sequence] [blastp]
XP_016469147.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  E.R. 2,  extr 1,  pero 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_016469146.2)
vacu 3,  E.R. 2,  extr 1,  pero 1,  cyto_E.R. 1  (predict for XP_016469147.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_016469146.2)
scret 9  (predict for XP_016469147.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107791572
nta-r.1
for
107761724
nta-r.1
for
107772855
sly-u.5
for
LAT59
sly-u.5
for
101257960
ath-u.5
for
AT2G02720
ath-u.5
for
AT3G01270
ath-u.5
for
AT5G15110
gma-u.5
for
102664159
gma-u.5
for
100780236
vvi-u.5
for
100254377
vvi-u.5
for
100262177
ghi-r.1
for
107898714
ghi-r.1
for
107919012
bna-r.1
for
125580832
bna-r.1
for
125594097
cit-r.1
for
127898591
cit-r.1
for
102621878
osa-u.5
for
4340103
osa-u.5
for
4340099
zma-u.5
for
100284055
zma-u.5
for
100284356
zma-u.5
for
107275230
tae-r.2
for
123136954
tae-r.2
for
123127312
tae-r.2
for
123144374


Ortholog ID: 483
Species nta nta nta sly sly sly ath ath ath gma gma vvi vvi bna cit osa osa zma zma zma tae tae tae
Symbol LOC107761724 LOC107823631 LOC107788586 LAT59 LOC101260096 LOC101264694 AT3G01270 AT5G15110 AT59 LOC100798579 LOC100810857 LOC100262177 LOC100257069 LOC106416640 LOC102621878 LOC4340103 LOC4340099 LOC100284055 LOC100284356 LOC542245 LOC123127312 LOC123167261 LOC123160072
Function* putative pectate lyase P59 pectate lyase-like pectate lyase-like pectate lyase P59 probable pectate lyase P59 probable pectate lyase P59 Pectate lyase family protein Pectate lyase family protein Pectate lyase family protein pectate lyase pectate lyase pectate lyase pectate lyase probable pectate lyase 6 probable pectate lyase 19 pectate lyase pectate lyase uncharacterized LOC100284055 pectate lyase male gametophyte-specific 2 pectate lyase pectate lyase pectate lyase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 12
nta00053 Ascorbate and aldarate metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 13
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 4
cit00460 Cyanoamino acid metabolism 3
cit00500 Starch and sucrose metabolism 3
cit00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 6
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 4
tae00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107761724 107823631 107788586 101253459 101260096 101264694 821142 831363 838004 100798579 100810857 100262177 100257069 106416640 102621878 4340103 4340099 100284055 100284356 542245 123127312 123167261 123160072
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