ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107793865	uncharacterized LOC107793865
nta-r.1	107817964	uncharacterized LOC107817964
nta-r.1	107779044	uncharacterized LOC107779044
nta-r.1	107788201	uncharacterized LOC107788201
sly-u.5	101267999	uncharacterized LOC101267999
sly-u.5	101247749	uncharacterized LOC101247749
sot-r.1	102592152	uncharacterized LOC102592152
sot-r.1	102606165	uncharacterized LOC102606165
ath-u.5	AT3G21480	BRCT domain-containing DNA repair protein
gma-u.5	100776747	uncharacterized LOC100776747
gma-u.5	100817763	uncharacterized LOC100817763
gma-u.5	100776211	uncharacterized LOC100776211
bra-r.6	103869170	uncharacterized LOC103869170
vvi-u.5	100266667	uncharacterized LOC100266667
ppo-u.5	7475918	uncharacterized LOC7475918
ppo-u.5	7457971	uncharacterized LOC7457971
mtr-u.5	11432048	uncharacterized LOC11432048
mtr-u.5	25499579	uncharacterized LOC25499579
ghi-r.1	107949168	uncharacterized LOC107949168
ghi-r.1	107952233	uncharacterized LOC107952233
ghi-r.1	107897536	uncharacterized LOC107897536
bna-r.1	106445999	uncharacterized LOC106445999
bna-r.1	106396872	uncharacterized LOC106396872
cit-r.1	102624319	uncharacterized LOC102624319
cit-r.1	102618575	uncharacterized LOC102618575
osa-u.5	4326509	uncharacterized LOC4326509
osa-u.5	107276126	uncharacterized LOC107276126
zma-u.5	103641379	uncharacterized LOC103641379
zma-u.5	100191401	BRCT domain-containing DNA repair protein
zma-u.5	100192867	uncharacterized LOC100192867
tae-r.2	123039477	mediator of DNA damage checkpoint protein 1
tae-r.2	123111650	mediator of DNA damage checkpoint protein 1
tae-r.2	123180430	mediator of DNA damage checkpoint protein 1
hvu-r.1	123445423	uncharacterized LOC123445423
hvu-r.1	123424766	mediator of DNA damage checkpoint protein 1
sbi-r.1	8081318	BRCT-containing protein 1
sbi-r.1	8069486	uncharacterized LOC8069486
bdi-r.1	100838468	uncharacterized LOC100838468
bdi-r.1	100831642	uncharacterized LOC100831642
cre-r.1	CHLRE_17g700500v5	uncharacterized protein

Top 50 coexpressed genes to 107793865 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107793865 (nta-r.1 coexpression data)

CoexMap"107793865"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016471826.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 2, cyto 1, extr 1

(predict for XP_016471826.1)

Subcellular
localization
TargetP

other 7, scret 4

(predict for XP_016471826.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107793865	nta-r.1 for 107817964	nta-r.1 for 107779044	nta-r.1 for 107788201	sly-u.5 for 101267999	sly-u.5 for 101247749	sot-r.1 for 102592152	sot-r.1 for 102606165	ath-u.5 for AT3G21480	gma-u.5 for 100776747	gma-u.5 for 100817763	gma-u.5 for 100776211	bra-r.6 for 103869170	vvi-u.5 for 100266667	ppo-u.5 for 7475918	ppo-u.5 for 7457971	mtr-u.5 for 11432048	mtr-u.5 for 25499579	ghi-r.1 for 107949168	ghi-r.1 for 107952233	ghi-r.1 for 107897536	bna-r.1 for 106445999	bna-r.1 for 106396872	cit-r.1 for 102624319	cit-r.1 for 102618575	osa-u.5 for 4326509	osa-u.5 for 107276126	zma-u.5 for 103641379	zma-u.5 for 100191401	zma-u.5 for 100192867	tae-r.2 for 123039477	tae-r.2 for 123111650	tae-r.2 for 123180430	hvu-r.1 for 123445423	hvu-r.1 for 123424766	sbi-r.1 for 8081318	sbi-r.1 for 8069486	bdi-r.1 for 100838468	bdi-r.1 for 100831642	cre-r.1 for CHLRE_17g700500v5

Ortholog

Ortholog ID: 2817

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107788201

uncharacterized LOC107793577

uncharacterized LOC142179359

uncharacterized LOC101267999

uncharacterized LOC101247749

uncharacterized LOC102592152

uncharacterized LOC102606165

BRCT domain-containing DNA repair protein

uncharacterized LOC100776747

uncharacterized LOC100776211

uncharacterized LOC103869170

uncharacterized LOC100266667

uncharacterized LOC7475918

uncharacterized LOC7457971

uncharacterized LOC11432048

uncharacterized LOC107952233

uncharacterized LOC107932160

uncharacterized LOC107916135

uncharacterized LOC106445999

uncharacterized LOC106396872

uncharacterized LOC102624319

uncharacterized LOC102618575

uncharacterized LOC4326509

uncharacterized LOC107276126

uncharacterized LOC103641379

BRCT domain-containing DNA repair protein

uncharacterized LOC100192867

mediator of DNA damage checkpoint protein 1

uncharacterized LOC123063385

uncharacterized LOC123445423

mediator of DNA damage checkpoint protein 1

BRCT-containing protein 1

uncharacterized LOC8069486

uncharacterized LOC100838468

uncharacterized LOC100831642

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	3
sly03440	Homologous recombination	3
sly03460	Fanconi anemia pathway	3
sly00240	Pyrimidine metabolism	2
sly01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	7
sot03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03440	Homologous recombination	3
sot03460	Fanconi anemia pathway	2
sot03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	5
ath03410	Base excision repair	4
ath03430	Mismatch repair	3
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	11
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03430	Mismatch repair	5
bra03030	DNA replication	3
bra03410	Base excision repair	3
bra03420	Nucleotide excision repair	3
bra03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	2
vvi03420	Nucleotide excision repair	2
vvi03430	Mismatch repair	2
vvi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2
ghi03420	Nucleotide excision repair	2
ghi03430	Mismatch repair	2
ghi03440	Homologous recombination	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	3
ghi04518	Integrin signaling	3
ghi04142	Lysosome	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	7
bna03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	7
bna03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	11
cit04626	Plant-pathogen interaction	2
cit03040	Spliceosome	2
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	3
osa01230	Biosynthesis of amino acids	3
osa01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03460	Fanconi anemia pathway	2
zma00190	Oxidative phosphorylation	2
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	3
zma00270	Cysteine and methionine metabolism	2
zma03410	Base excision repair	2
zma03420	Nucleotide excision repair	2
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	3
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	5
bdi03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

107788201

107793577

142179359

101267999

101247749

102592152

102606165

821702

100776747

100776211

103869170

100266667

7475918

7457971

11432048

107952233

107932160

107916135

106445999

106396872

102624319

102618575

4326509

107276126

103641379

100191401

100192867

123180430

123072362

123063385

123445423

123424766

8081318

8069486

100838468

100831642

5717310

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	2	1	3	1	1	2	2	3	2	2	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107793865 (nta-r.1 coexpression data)

Top 50 enrichment test to 107793865 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**