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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107795378   ras-related protein Rab7 
 sly-u.5   101261599   ras-related protein Rab7 
 sly-u.5   101263553   ras-related protein RABG3f 
 ath-u.5   RABG3c   RAB GTPase homolog G3C 
 ath-u.5   RAB7B   RAB GTPase homolog G3F 
 ath-u.5   RABG3E   RAB GTPase homolog G3E 
 gma-u.5   100795309   ras-related protein Rab7 
 gma-u.5   100783389   ras-related protein Rab7 
 gma-u.5   100305642   uncharacterized LOC100305642 
 vvi-u.5   100249742   ras-related protein Rab7 
 vvi-u.5   100853135   ras-related protein Rab7 
 ppo-u.5   7483525   ras-related protein Rab7 
 ppo-u.5   7475065   ras-related protein Rab7 
 ppo-u.5   7464034   ras-related protein Rab7 
 mtr-u.5   11434770   ras-related protein Rab7 
 mtr-u.5   11417478   ras-related protein Rab7 
 mtr-u.5   11411545   ras-related protein Rab7 
 osa-u.5   4339322   ras-related protein Rab7 
 osa-u.5   4327180   ras-related protein Rab7 
 zma-u.5   100272622   Ras-related protein RABG3f 
 zma-u.5   100283666   uncharacterized LOC100283666 
 zma-u.5   100383121   uncharacterized LOC100383121 

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Top 50 coexpressed genes to 107795378 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107795378 (nta-r.1 coexpression data)

CoexMap"107795378"


ntaLOC107795378 | Entrez gene ID : 107795378    
Species nta sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae bna
Paralog 1 2 3 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta04144 [list] [network] Endocytosis (334 genes)
nta04145 [list] [network] Phagosome (178 genes)
nta04148 [list] [network] Efferocytosis (114 genes)
GO BP
GO CC
GO:0005774 [list] [network] vacuolar membrane  (165 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (419 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (486 genes)  IEA  
Protein XP_016473491.1 [sequence] [blastp]
XP_016473492.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016473491.1)
chlo 10  (predict for XP_016473492.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016473491.1)
mito 7  (predict for XP_016473492.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107795378

.
sly-u.5
for
101261599

.
sly-u.5
for
101263553

.
ath-u.5
for
RABG3c

.
ath-u.5
for
RAB7B

.
ath-u.5
for
RABG3E

.
gma-u.5
for
100795309

.
gma-u.5
for
100783389

.
gma-u.5
for
100305642

.
vvi-u.5
for
100249742

.
vvi-u.5
for
100853135

.
ppo-u.5
for
7483525

.
ppo-u.5
for
7475065

.
ppo-u.5
for
7464034

.
mtr-u.5
for
11434770

.
mtr-u.5
for
11417478

.
mtr-u.5
for
11411545

.
osa-u.5
for
4339322

.
osa-u.5
for
4327180

.
zma-u.5
for
100272622

.
zma-u.5
for
100283666

.
zma-u.5
for
100383121

.


Ortholog ID: 1312
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RABG3c RABG3E LOC100783389 LOC100305824 LOC101261599 LOC101263553 LOC4327180 LOC4339322 LOC100283666 LOC100383121 LOC103837716 LOC103859775 LOC100249742 LOC100853135 LOC7464034 LOC7475065 LOC11434770 LOC11411545 LOC123079175 LOC123060776 LOC123443235 LOC123447142 LOC107952145 LOC107897195 LOC106390276 LOC125608966 CHLRE_06g311900v5 LOC8082976 LOC8081363 LOC102577689 LOC102587231 LOC102618424 LOC102609040 LOC100829797 LOC100827564 LOC107793441 LOC107828863
Function* RAB GTPase homolog G3C RAB GTPase homolog G3E ras-related protein Rab7 uncharacterized LOC100305824 ras-related protein Rab7 ras-related protein RABG3f ras-related protein Rab7 ras-related protein Rab7 uncharacterized LOC100283666 uncharacterized LOC100383121 ras-related protein RABG3f ras-related protein RABG3f ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7-like ras-related protein Rab7-like ras-related protein Rab7 ras-related protein RABG3f ras-related protein RABG3f uncharacterized protein ras-related protein Rab7 ras-related protein Rab7 uncharacterized LOC102577689 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein Rab7 ras-related protein RABG3f ras-related protein RABG3f
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 3
ath04148 Efferocytosis 3
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
ath04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath00190 Oxidative phosphorylation 4
ath04145 Phagosome 3
ath04120 Ubiquitin mediated proteolysis 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04145 Phagosome 6
gma00190 Oxidative phosphorylation 4
gma00260 Glycine, serine and threonine metabolism 3
gma00630 Glyoxylate and dicarboxylate metabolism 3
gma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04145 Phagosome 3
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 6
sly04144 Endocytosis 4
sly04141 Protein processing in endoplasmic reticulum 2
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
osa04144 Endocytosis 2
osa00280 Valine, leucine and isoleucine degradation 2
osa00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 6
osa03250 Viral life cycle - HIV-1 2
osa00190 Oxidative phosphorylation 2
osa04145 Phagosome 2
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04145 Phagosome 6
zma04144 Endocytosis 4
zma00190 Oxidative phosphorylation 4
zma04148 Efferocytosis 3
zma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra04130 SNARE interactions in vesicular transport 2
bra04145 Phagosome 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra04145 Phagosome 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04145 Phagosome 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
ppo04144 Endocytosis 4
ppo04145 Phagosome 4
ppo04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 3
mtr04144 Endocytosis 2
mtr04148 Efferocytosis 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 8
mtr00190 Oxidative phosphorylation 7
mtr04144 Endocytosis 5
mtr04142 Lysosome 4
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 5
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 4
hvu04144 Endocytosis 4
hvu04120 Ubiquitin mediated proteolysis 3
hvu04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi00790 Folate biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 11
bna04145 Phagosome 9
bna04148 Efferocytosis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 14
bna04145 Phagosome 9
bna04148 Efferocytosis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre04144 Endocytosis 3
cre03040 Spliceosome 2
cre04145 Phagosome 2
cre04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 7
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03015 mRNA surveillance pathway 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 4
sot00190 Oxidative phosphorylation 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 6
sot03050 Proteasome 3
sot04145 Phagosome 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit03050 Proteasome 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04145 Phagosome 2
cit04148 Efferocytosis 2
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi04145 Phagosome 4
bdi04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi00941 Flavonoid biosynthesis 3
bdi00541 Biosynthesis of various nucleotide sugars 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04136 Autophagy - other 4
nta04382 Cornified envelope formation 4
nta04626 Plant-pathogen interaction 4
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00940 Phenylpropanoid biosynthesis 2
nta04130 SNARE interactions in vesicular transport 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820855 841353 100783389 100305824 101261599 101263553 4327180 4339322 100283666 100383121 103837716 103859775 100249742 100853135 7464034 7475065 11434770 11411545 123079175 123060776 123443235 123447142 107952145 107897195 106390276 125608966 5716775 8082976 8081363 102577689 102587231 102618424 102609040 100829797 100827564 107793441 107828863
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