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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107801274  pentatricopeptide repeat-containing protein At5g08510-like 
 sly-u.5  101259080  pentatricopeptide repeat-containing protein At5g08510 
 ath-u.5  AT5G08510  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100854090  pentatricopeptide repeat-containing protein At5g08510 
 ppo-u.5  7457416  pentatricopeptide repeat-containing protein At5g08510 
 mtr-u.5  11440392  pentatricopeptide repeat-containing protein At5g08510 
 osa-u.5  4339964  pentatricopeptide repeat-containing protein At5g08510 
 zma-u.5  103638156  pentatricopeptide repeat-containing protein At5g08510 

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Top 50 coexpressed genes to 107801274 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107801274 (nta-r.1 coexpression data)

CoexMap"107801274"


ntaLOC107801274 | Entrez gene ID : 107801274
Species nta sly ath vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi gma tae cre sot
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016480050.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_016480050.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016480050.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107801274


sly-u.5
for
101259080


ath-u.5
for
AT5G08510


vvi-u.5
for
100854090


ppo-u.5
for
7457416


mtr-u.5
for
11440392


osa-u.5
for
4339964


zma-u.5
for
103638156



Ortholog ID: 10282
Species nta nta sly sot ath bra vvi ppo mtr ghi ghi bna bna osa zma hvu sbi bdi
Symbol LOC107817506 LOC107801274 LOC101259080 LOC102592727 AT5G08510 LOC103847165 LOC100854090 LOC7457416 LOC11440392 LOC107948156 LOC107945904 LOC106419420 LOC111201526 LOC4339964 LOC103638156 LOC123412257 LOC8068366 LOC100844637
Function* pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510-like pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510 pentatricopeptide repeat-containing protein At5g08510
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00340 Histidine metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107817506 107801274 101259080 102592727 830750 103847165 100854090 7457416 11440392 107948156 107945904 106419420 111201526 4339964 103638156 123412257 8068366 100844637
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