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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107812250   uncharacterized LOC107812250 
 nta-r.1   107767368   uncharacterized LOC107767368 
 sly-u.5   101244815   translation initiation factor IF3-1, mitochondrial 
 ath-u.5   AT1G34360   translation initiation factor 3 (IF-3) family protein 
 gma-u.5   100808433   translation initiation factor IF3-1, mitochondrial 
 gma-u.5   100306622   translation initiation factor IF3-1, mitochondrial 
 bra-r.6   103846005   translation initiation factor IF3-1, mitochondrial 
 vvi-u.5   100248653   translation initiation factor IF3-1, mitochondrial 
 ppo-u.5   7494233   translation initiation factor IF3-1, mitochondrial 
 mtr-u.5   25485630   translation initiation factor IF3-1, mitochondrial 
 ghi-r.1   107908644   translation initiation factor IF3-1, mitochondrial 
 ghi-r.1   107927992   translation initiation factor IF3-1, mitochondrial 
 bna-r.1   125583727   translation initiation factor IF3-1, mitochondrial-like 
 cit-r.1   102615749   translation initiation factor IF3-1, mitochondrial 
 osa-u.5   4327978   translation initiation factor IF3-1, mitochondrial 
 zma-u.5   100191874   uncharacterized LOC100191874 
 tae-r.2   123131545   translation initiation factor IF3-1, mitochondrial 
 hvu-r.1   123406310   translation initiation factor IF3-1, mitochondrial 
 sbi-r.1   8071523   translation initiation factor IF3-1, mitochondrial 
 bdi-r.1   100844078   translation initiation factor IF3-1, mitochondrial 

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Top 50 coexpressed genes to 107812250 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107812250 (nta-r.1 coexpression data)

CoexMap"107812250"


ntaLOC107812250 | Entrez gene ID : 107812250      
Species nta sly ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre sot
Paralog 2 1 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032790 [list] [network] ribosome disassembly  (18 genes)  IEA  
GO:0006413 [list] [network] translational initiation  (106 genes)  IEA  
GO CC
GO MF
GO:0043022 [list] [network] ribosome binding  (89 genes)  IEA  
GO:0003743 [list] [network] translation initiation factor activity  (138 genes)  IEA  
Protein XP_016492793.1 [sequence] [blastp]
XP_016492794.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 2  (predict for XP_016492793.1)
chlo 5,  nucl 2,  mito 2  (predict for XP_016492794.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_016492793.1)
mito 4  (predict for XP_016492794.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107812250
nta-r.1
for
107767368
sly-u.5
for
101244815
ath-u.5
for
AT1G34360
gma-u.5
for
100808433
gma-u.5
for
100306622
bra-r.6
for
103846005
vvi-u.5
for
100248653
ppo-u.5
for
7494233
mtr-u.5
for
25485630
ghi-r.1
for
107908644
ghi-r.1
for
107927992
bna-r.1
for
125583727
cit-r.1
for
102615749
osa-u.5
for
4327978
zma-u.5
for
100191874
tae-r.2
for
123131545
hvu-r.1
for
123406310
sbi-r.1
for
8071523
bdi-r.1
for
100844078


Ortholog ID: 7061
Species nta nta sly ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107812250 LOC107767368 LOC101244815 AT1G34360 LOC100808433 LOC100306622 LOC103846005 LOC100248653 LOC7494233 LOC25485630 LOC107908644 LOC107927992 LOC106428729 LOC106347118 LOC102615749 LOC4327978 LOC100191874 LOC123113806 LOC123123308 LOC123406310 LOC8071523 LOC100844078
Function* uncharacterized LOC107812250 uncharacterized LOC107767368 translation initiation factor IF3-1, mitochondrial translation initiation factor 3 (IF-3) family protein translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial-like translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial uncharacterized LOC100191874 translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial translation initiation factor IF3-1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00020 Citrate cycle (TCA cycle) 4
bra00270 Cysteine and methionine metabolism 2
bra00566 Sulfoquinovose metabolism 2
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03060 Protein export 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna03060 Protein export 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
osa03010 Ribosome 2
osa00510 N-Glycan biosynthesis 2
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107812250 107767368 101244815 840338 100808433 100306622 103846005 100248653 7494233 25485630 107908644 107927992 106428729 106347118 102615749 4327978 100191874 123113806 123123308 123406310 8071523 100844078
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