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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107813613   chalcone synthase A 
 nta-r.1   107809744   chalcone synthase 2 
 nta-r.1   107801774   chalcone synthase 
 nta-r.1   107826422   chalcone synthase 2-like 
 sly-u.5   CHS2   chalcone synthase 
 sot-r.1   102595537   chalcone synthase J 
 sot-r.1   CHS2   chalcone synthase 2 
 ath-u.5   TT4   Chalcone and stilbene synthase family protein 
 gma-u.5   121175284   chalcone synthase 1 
 gma-u.5   CHS4A   chalcone synthase 4a 
 gma-u.5   CHS4B   chalcone synthase 4b 
 bra-r.6   103856040   chalcone synthase 3 
 bra-r.6   103850907   chalcone synthase 3 
 bra-r.6   103846527   chalcone synthase 1 
 vvi-u.5   100264844   stilbene synthase 5-like 
 vvi-u.5   100263443   chalcone synthase 
 ppo-u.5   7460520   chalcone synthase 1 
 ppo-u.5   7493197   chalcone synthase 1 
 ppo-u.5   7460519   chalcone synthase 1 
 mtr-u.5   11411483   chalcone synthase 1A 
 mtr-u.5   11407003   chalcone synthase 4 
 mtr-u.5   25494498   chalcone synthase 9 
 ghi-r.1   107927759   chalcone synthase 1 
 ghi-r.1   107934810   chalcone synthase 2 
 ghi-r.1   107914895   chalcone synthase 1-like 
 bna-r.1   111204286   chalcone synthase 3-like 
 bna-r.1   125579034   chalcone synthase 1 
 bna-r.1   106367233   chalcone synthase 3 
 cit-r.1   102606708   chalcone synthase 1 
 cit-r.1   102619137   acridone synthase 2-like 
 cit-r.1   102612856   chalcone synthase 2-like 
 osa-u.5   4342725   chalcone synthase 2 
 osa-u.5   4350636   chalcone synthase 1-like 
 zma-u.5   100282642   chalcone synthase 
 zma-u.5   100274415   chalcone synthase 
 tae-r.2   123187050   chalcone synthase 2 
 tae-r.2   123055015   chalcone synthase 2 
 hvu-r.1   123420058   chalcone synthase 2 
 hvu-r.1   123424400   chalcone synthase 2-like 
 hvu-r.1   123428233   chalcone synthase 1 
 sbi-r.1   8064818   chalcone synthase 3 
 sbi-r.1   8064817   chalcone synthase 1 
 sbi-r.1   8064819   chalcone synthase 7 
 bdi-r.1   100829639   chalcone synthase 2 

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Top 50 coexpressed genes to 107813613 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107813613 (nta-r.1 coexpression data)

CoexMap"107813613"


ntaLOC107813613 | Entrez gene ID : 107813613    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 1 2 1 3 3 2 3 3 3 3 3 2 2 2 3 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00941 [list] [network] Flavonoid biosynthesis (93 genes)
nta04712 [list] [network] Circadian rhythm - plant (92 genes)
GO BP
GO:0030639 [list] [network] polyketide biosynthetic process  (11 genes)  IEA  
GO CC
GO MF
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (614 genes)  IEA  
Protein XP_016494384.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  pero 1,  chlo 1,  nucl 1  (predict for XP_016494384.1)
Subcellular
localization
TargetP
other 7,  mito 5  (predict for XP_016494384.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107813613
nta-r.1
for
107809744
nta-r.1
for
107801774
nta-r.1
for
107826422
sly-u.5
for
CHS2
sot-r.1
for
102595537
sot-r.1
for
CHS2
ath-u.5
for
TT4
gma-u.5
for
121175284
gma-u.5
for
CHS4A
gma-u.5
for
CHS4B
bra-r.6
for
103856040
bra-r.6
for
103850907
bra-r.6
for
103846527
vvi-u.5
for
100264844
vvi-u.5
for
100263443
ppo-u.5
for
7460520
ppo-u.5
for
7493197
ppo-u.5
for
7460519
mtr-u.5
for
11411483
mtr-u.5
for
11407003
mtr-u.5
for
25494498
ghi-r.1
for
107927759
ghi-r.1
for
107934810
ghi-r.1
for
107914895
bna-r.1
for
111204286
bna-r.1
for
125579034
bna-r.1
for
106367233
cit-r.1
for
102606708
cit-r.1
for
102619137
cit-r.1
for
102612856
osa-u.5
for
4342725
osa-u.5
for
4350636
zma-u.5
for
100282642
zma-u.5
for
100274415
tae-r.2
for
123187050
tae-r.2
for
123055015
hvu-r.1
for
123420058
hvu-r.1
for
123424400
hvu-r.1
for
123428233
sbi-r.1
for
8064818
sbi-r.1
for
8064817
sbi-r.1
for
8064819
bdi-r.1
for
100829639


Ortholog ID: 258
Species nta nta nta sly sly sot ath gma gma gma bra bra bra vvi vvi vvi ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit cit osa osa zma zma tae tae hvu hvu hvu sbi sbi sbi bdi
Symbol LOC107801774 LOC107832236 LOC107813425 CHS2 CHS1 LOC102580017 TT4 CHS4B CHS7 CHS3B LOC103850907 LOC103846527 LOC103836793 LOC100263443 LOC100855299 LOC100246283 LOC7466313 LOC11411483 LOC11428910 LOC25499670 LOC107934810 LOC107888447 LOC107888463 LOC125579034 LOC106367233 LOC106426632 LOC102606708 LOC102619137 LOC102612856 LOC4342725 LOC4350636 LOC100282642 LOC100274415 LOC123123471 LOC123123470 LOC123442440 LOC123442699 LOC123442962 LOC8069670 LOC8064814 LOC8064815 LOC100829639
Function* chalcone synthase chalcone synthase G chalcone synthase J chalcone synthase chalcone synthase chalcone synthase 1B-like Chalcone and stilbene synthase family protein chalcone synthase 4b chalcone synthase 7 chalcone synthase 3 chalcone synthase 3 chalcone synthase 1 chalcone synthase 3 chalcone synthase stilbene synthase 2 stilbene synthase 5-like chalcone synthase chalcone synthase 1A chalcone synthase 5 chalcone synthase 4 chalcone synthase 2 chalcone synthase chalcone synthase 2 chalcone synthase 1 chalcone synthase 3 chalcone synthase 3-like chalcone synthase 1 acridone synthase 2-like chalcone synthase 2-like chalcone synthase 2 chalcone synthase 1-like chalcone synthase chalcone synthase chalcone synthase 2 chalcone synthase 2 chalcone synthase 2-like chalcone synthase 2-like chalcone synthase 2-like chalcone synthase 1 chalcone synthase 2 chalcone synthase 2 chalcone synthase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00941 Flavonoid biosynthesis 10
nta04712 Circadian rhythm - plant 4
nta00944 Flavone and flavonol biosynthesis 3
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta00904 Diterpenoid biosynthesis 4
nta00941 Flavonoid biosynthesis 2
nta04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 3
nta00904 Diterpenoid biosynthesis 3
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 7
sly00944 Flavone and flavonol biosynthesis 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 7
sot04712 Circadian rhythm - plant 3
sot00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 2
ath00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 12
gma04712 Circadian rhythm - plant 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00360 Phenylalanine metabolism 2
gma00940 Phenylpropanoid biosynthesis 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 11
gma04712 Circadian rhythm - plant 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 8
bra00940 Phenylpropanoid biosynthesis 4
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00941 Flavonoid biosynthesis 9
bra00940 Phenylpropanoid biosynthesis 3
bra04712 Circadian rhythm - plant 3
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00941 Flavonoid biosynthesis 8
vvi04712 Circadian rhythm - plant 3
vvi00940 Phenylpropanoid biosynthesis 3
vvi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 19
vvi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
vvi00940 Phenylpropanoid biosynthesis 2
vvi00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 11
ppo04712 Circadian rhythm - plant 4
ppo00940 Phenylpropanoid biosynthesis 3
ppo00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 8
mtr04712 Circadian rhythm - plant 7
mtr00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 13
mtr04712 Circadian rhythm - plant 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 13
mtr04712 Circadian rhythm - plant 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 12
ghi04712 Circadian rhythm - plant 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 7
ghi04712 Circadian rhythm - plant 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00941 Flavonoid biosynthesis 7
ghi04712 Circadian rhythm - plant 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00941 Flavonoid biosynthesis 14
bna04712 Circadian rhythm - plant 9
bna00071 Fatty acid degradation 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit01230 Biosynthesis of amino acids 5
cit00020 Citrate cycle (TCA cycle) 3
cit00480 Glutathione metabolism 2
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 4
cit00996 Biosynthesis of various alkaloids 2
cit00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 2
cit00941 Flavonoid biosynthesis 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00941 Flavonoid biosynthesis 6
osa00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 7
zma04712 Circadian rhythm - plant 2
zma00460 Cyanoamino acid metabolism 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00941 Flavonoid biosynthesis 8
zma04712 Circadian rhythm - plant 2
zma00940 Phenylpropanoid biosynthesis 2
zma00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00941 Flavonoid biosynthesis 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 5
hvu04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 7
hvu04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 14
sbi04712 Circadian rhythm - plant 9
sbi00944 Flavone and flavonol biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 14
sbi04712 Circadian rhythm - plant 9
sbi00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00941 Flavonoid biosynthesis 5
bdi00944 Flavone and flavonol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107801774 107832236 107813425 778295 778294 102580017 831241 100792581 100782897 106794283 103850907 103846527 103836793 100263443 100855299 100246283 7466313 11411483 11428910 25499670 107934810 107888447 107888463 125579034 106367233 106426632 102606708 102619137 102612856 4342725 4350636 100282642 100274415 123123471 123123470 123442440 123442699 123442962 8069670 8064814 8064815 100829639
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