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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107813638  pentatricopeptide repeat-containing protein At4g21065-like 
 sly-u.5  101261037  pentatricopeptide repeat-containing protein At4g21065-like 
 gma-u.5  100778415  pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5  100255899  pentatricopeptide repeat-containing protein At4g21065-like 
 mtr-u.5  11425697  pentatricopeptide repeat-containing protein At4g21065 
 osa-u.5  4334603  pentatricopeptide repeat-containing protein At4g21065 
 zma-u.5  100279406  uncharacterized LOC100279406 

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Top 50 coexpressed genes to 107813638 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107813638 (nta-r.1 coexpression data)

CoexMap"107813638"


ntaLOC107813638 | Entrez gene ID : 107813638
Species nta sly gma vvi mtr osa zma hvu bna cit bra ghi ppo sbi bdi ath tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016494406.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_016494406.2)
Subcellular
localization
TargetP
other 2  (predict for XP_016494406.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107813638


sly-u.5
for
101261037


gma-u.5
for
100778415


vvi-u.5
for
100255899


mtr-u.5
for
11425697


osa-u.5
for
4334603


zma-u.5
for
100279406



Ortholog ID: 12777
Species nta nta sly sot gma vvi mtr ghi cit osa zma hvu sbi bdi
Symbol LOC107813638 LOC107800050 LOC101261037 LOC102588160 LOC100778415 LOC100255899 LOC11425697 LOC107906886 LOC102617106 LOC4334603 LOC100279406 LOC123397320 LOC8057360 LOC100836810
Function* pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065 uncharacterized LOC100279406 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 12
osa00190 Oxidative phosphorylation 5
osa03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107813638 107800050 101261037 102588160 100778415 100255899 11425697 107906886 102617106 4334603 100279406 123397320 8057360 100836810
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