ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107815813	cytochrome b
sly-u.5	cob	apocytochrome b
ath-u.5	AT2G07727	cytochrome b
ath-u.5	cob	apocytochrome b
vvi-u.5	cob2	apocytochrome b
mtr-u.5	cob	apocytochrome b
ghi-r.1	cob	apocytochrome b
bna-r.1	cob	apocytochrome b
cit-r.1	cob	apocytochrome b
tae-r.2	cob	cob
sbi-r.1	cob-1	apocytochrome b

functional annotation

KEGG

nta00190 [list] [network] Oxidative phosphorylation (303 genes)

GO BP

GO:0006122 [list] [network] mitochondrial electron transport, ubiquinol to cytochrome c

(12 genes)

IEA

GO CC

GO:0045275 [list] [network] respiratory chain complex III	(12 genes)	IEA
GO:0016020 [list] [network] membrane	(5892 genes)	IEA

GO MF

GO:0008121 [list] [network] quinol-cytochrome-c reductase activity

(5 genes)

IEA

Protein

XP_016496934.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 1, chlo 1, extr 1, golg 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_016496934.2)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_016496934.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107815813	sly-u.5 for cob	ath-u.5 for AT2G07727	ath-u.5 for cob	vvi-u.5 for cob2	mtr-u.5 for cob	ghi-r.1 for cob	bna-r.1 for cob	cit-r.1 for cob	tae-r.2 for cob	sbi-r.1 for cob-1

Ortholog ID: 13143

Species

nta

sly

ath

vvi

mtr

ghi

bna

cit

tae

sbi

Symbol

LOC107815813

cob

AT2G07727

cob

cob2

cob

cob-1

Function^*

cytochrome b

apocytochrome b

cytochrome b

apocytochrome b

cob

apocytochrome b

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	7
nta03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	10
sly03010	Ribosome	3
sly00020	Citrate cycle (TCA cycle)	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	12
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	11
vvi03010	Ribosome	5
vvi00020	Citrate cycle (TCA cycle)	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	14
mtr03010	Ribosome	3
mtr00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	8
ghi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	8
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	11
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	11
sbi03010	Ribosome	4

Expression

Expression pattern

Entrez Gene ID^*

107815813

34678274

815400

36335690

7498619

26974328

24679514

4237881

36487061

34688782

4306041

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107815813 (nta-r.1 coexpression data)

Top 50 enrichment test to 107815813 (nta-r.1 coexpression data)


Species	nta	sly	ath	vvi	mtr	ghi	bna	cit	tae	sbi	sot	bdi	osa	ppo	zma	cre	hvu	gma	bra
Paralog	1	1	2	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107815813 (nta-r.1 coexpression data)

Top 50 enrichment test to 107815813 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**