ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107829057	uncharacterized LOC107829057
nta-r.1	107773903	uncharacterized LOC107773903
nta-r.1	107775544	uncharacterized LOC107775544
sly-u.5	101262450	uncharacterized LOC101262450
sot-r.1	102592059	importin-5-like
sot-r.1	102599158	importin-5-like
ath-u.5	emb2734	ARM repeat superfamily protein
gma-u.5	100805849	importin-5
gma-u.5	100797431	importin-5
gma-u.5	100787600	importin-5
bra-r.6	103851301	importin-5
bra-r.6	103845721	importin-5
bra-r.6	103856396	importin-5
vvi-u.5	100264144	uncharacterized LOC100264144
vvi-u.5	100265730	uncharacterized LOC100265730
ppo-u.5	7463573	uncharacterized LOC7463573
ppo-u.5	7457697	uncharacterized LOC7457697
ppo-u.5	7474658	uncharacterized LOC7474658
mtr-u.5	11419041	importin-5
mtr-u.5	11436838	importin-5
ghi-r.1	107901999	importin-5
ghi-r.1	107943030	importin-5
ghi-r.1	107944248	importin-5
bna-r.1	106439468	importin-5-like
bna-r.1	106386743	importin-5
bna-r.1	125596324	importin-5-like
cit-r.1	102619446	uncharacterized LOC102619446
cit-r.1	102625070	uncharacterized LOC102625070
osa-u.5	4333825	uncharacterized LOC4333825
osa-u.5	4343696	uncharacterized LOC4343696
zma-u.5	100273504	uncharacterized LOC100273504
zma-u.5	103633334	importin-5
tae-r.2	123052316	importin-5
tae-r.2	123044456	importin-5
tae-r.2	123188091	importin-5
hvu-r.1	123447316	importin-5-like
hvu-r.1	123425593	importin-5-like
sbi-r.1	8055684	importin-5
sbi-r.1	8062946	importin-5
bdi-r.1	100821182	importin-5
bdi-r.1	100843009	importin-5
cre-r.1	CHLRE_14g633750v5	uncharacterized protein

Top 50 coexpressed genes to 107829057 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107829057 (nta-r.1 coexpression data)

CoexMap"107829057"

[Cytoscape]

Annotation

functional annotation

KEGG

nta03013 [list] [network] Nucleocytoplasmic transport (255 genes)

GO BP

GO:0006606 [list] [network] protein import into nucleus

(127 genes)

IEA

GO CC

GO MF

GO:0031267 [list] [network] small GTPase binding

(65 genes)

IEA

Protein

XP_016511971.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 3, chlo 1, nucl 1, cyto 1, cyto_nucl 1, golg_plas 1, cysk_plas 1

(predict for XP_016511971.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_016511971.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107829057	nta-r.1 for 107773903	nta-r.1 for 107775544	sly-u.5 for 101262450	sot-r.1 for 102592059	sot-r.1 for 102599158	ath-u.5 for emb2734	gma-u.5 for 100805849	gma-u.5 for 100797431	gma-u.5 for 100787600	bra-r.6 for 103851301	bra-r.6 for 103845721	bra-r.6 for 103856396	vvi-u.5 for 100264144	vvi-u.5 for 100265730	ppo-u.5 for 7463573	ppo-u.5 for 7457697	ppo-u.5 for 7474658	mtr-u.5 for 11419041	mtr-u.5 for 11436838	ghi-r.1 for 107901999	ghi-r.1 for 107943030	ghi-r.1 for 107944248	bna-r.1 for 106439468	bna-r.1 for 106386743	bna-r.1 for 125596324	cit-r.1 for 102619446	cit-r.1 for 102625070	osa-u.5 for 4333825	osa-u.5 for 4343696	zma-u.5 for 100273504	zma-u.5 for 103633334	tae-r.2 for 123052316	tae-r.2 for 123044456	tae-r.2 for 123188091	hvu-r.1 for 123447316	hvu-r.1 for 123425593	sbi-r.1 for 8055684	sbi-r.1 for 8062946	bdi-r.1 for 100821182	bdi-r.1 for 100843009	cre-r.1 for CHLRE_14g633750v5

Ortholog

Ortholog ID: 3263

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

emb2734

Function^*

uncharacterized LOC107829057

uncharacterized LOC107773903

uncharacterized LOC107775544

uncharacterized LOC101262450

importin-5-like

ARM repeat superfamily protein

importin-5

uncharacterized LOC100264144

uncharacterized LOC100265730

uncharacterized LOC7463573

uncharacterized LOC7457697

uncharacterized LOC7474658

importin-5

importin-5-like

importin-5

importin-5-like

uncharacterized LOC102619446

uncharacterized LOC102625070

uncharacterized LOC4333825

uncharacterized LOC4343696

uncharacterized LOC100273504

importin-5

importin-5-like

importin-5

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	9
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot03008	Ribosome biogenesis in eukaryotes	3
sot03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	9
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	10
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	9
gma04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	7
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	3
bra03015	mRNA surveillance pathway	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	5
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	6
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4
mtr04144	Endocytosis	3
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	7
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	7
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	8
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit04144	Endocytosis	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	6
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	5
osa03083	Polycomb repressive complex	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	7
zma04142	Lysosome	4
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	4
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	9
tae00970	Aminoacyl-tRNA biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	6
tae03013	Nucleocytoplasmic transport	5
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae03040	Spliceosome	3
tae03013	Nucleocytoplasmic transport	3
tae03008	Ribosome biogenesis in eukaryotes	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	3
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	6
sbi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4
bdi03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00240	Pyrimidine metabolism	2
cre01240	Biosynthesis of cofactors	2
cre03020	RNA polymerase	2
cre03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

107829057

107773903

107775544

101262450

102592059

102599158

832102

100805849

100787600

100780183

103851301

103845721

103856396

100264144

100265730

7463573

7457697

7474658

11419041

11436838

107901999

107891729

107935234

106439468

106386743

125596324

102619446

102625070

4333825

4343696

100273504

103633334

123052316

123044456

123087170

123447316

123425593

8055684

8062946

100821182

100843009

5718327

The preparation time of this page was 1.9 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	1	3	3	2	3	2	3	3	2	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107829057 (nta-r.1 coexpression data)

Top 50 enrichment test to 107829057 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**