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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107830029   pentatricopeptide repeat-containing protein At5g59600 
 nta-r.1   107765936   pentatricopeptide repeat-containing protein At5g59600 
 sly-u.5   101265658   pentatricopeptide repeat-containing protein At5g59600 
 sot-r.1   102604107   pentatricopeptide repeat-containing protein At5g59600-like 
 vvi-u.5   104879588   pentatricopeptide repeat-containing protein At5g59600 
 ghi-r.1   107906747   pentatricopeptide repeat-containing protein At5g59600 
 ghi-r.1   107959327   pentatricopeptide repeat-containing protein At5g59600 
 cit-r.1   102627739   pentatricopeptide repeat-containing protein At5g59600-like 

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Top 50 coexpressed genes to 107830029 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107830029 (nta-r.1 coexpression data)

CoexMap"107830029"


ntaLOC107830029 | Entrez gene ID : 107830029      
Species nta sly sot vvi ghi cit bdi osa tae bna ppo zma cre mtr sbi gma bra ath hvu
Paralog 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016512990.1 [sequence] [blastp]
XP_016512991.1 [sequence] [blastp]
XP_016512992.1 [sequence] [blastp]
XP_016512993.1 [sequence] [blastp]
XP_016512994.1 [sequence] [blastp]
XP_016512995.1 [sequence] [blastp]
XP_016512996.1 [sequence] [blastp]
XP_075094431.1 [sequence] [blastp]
XP_075094436.1 [sequence] [blastp]
XP_075094440.1 [sequence] [blastp]
XP_075094442.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512990.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512991.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512992.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512993.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512994.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512995.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_016512996.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_075094431.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_075094436.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_075094440.1)
chlo 6,  cyto 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_075094442.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_016512990.1)
scret 6  (predict for XP_016512991.1)
scret 6  (predict for XP_016512992.1)
scret 6  (predict for XP_016512993.1)
scret 6  (predict for XP_016512994.1)
scret 6  (predict for XP_016512995.1)
scret 6  (predict for XP_016512996.1)
scret 6  (predict for XP_075094431.1)
scret 6  (predict for XP_075094436.1)
scret 6  (predict for XP_075094440.1)
scret 6  (predict for XP_075094442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107830029
nta-r.1
for
107765936
sly-u.5
for
101265658
sot-r.1
for
102604107
vvi-u.5
for
104879588
ghi-r.1
for
107906747
ghi-r.1
for
107959327
cit-r.1
for
102627739


Ortholog ID: 14568
Species nta nta sly sot vvi ghi ghi cit
Symbol LOC107830029 LOC107765936 LOC101265658 LOC102604107 LOC104879588 LOC107906747 LOC107959327 LOC102627739
Function* pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600 pentatricopeptide repeat-containing protein At5g59600-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly03015 mRNA surveillance pathway 3
sly00220 Arginine biosynthesis 2
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107830029 107765936 101265658 102604107 104879588 107906747 107959327 102627739
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