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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107830702   polygalacturonase At1g48100-like 
 sly-u.5   101244077   polygalacturonase At1g48100 
 ath-u.5   AT3G26610   Pectin lyase-like superfamily protein 
 mtr-u.5   11407882   polygalacturonase At1g48100 
 ghi-r.1   107902953   polygalacturonase At1g48100 
 ghi-r.1   121229172   polygalacturonase At1g48100 
 bna-r.1   106350894   polygalacturonase At1g48100 
 bna-r.1   106409262   polygalacturonase At1g48100 

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Top 50 coexpressed genes to 107830702 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107830702 (nta-r.1 coexpression data)

CoexMap"107830702"


ntaLOC107830702 | Entrez gene ID : 107830702      
Species nta sly ath mtr ghi bna gma bra sot zma ppo sbi cit cre tae osa hvu vvi bdi
Paralog 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00040 [list] [network] Pentose and glucuronate interconversions (239 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1425 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (108 genes)  IEA  
Protein XP_016513823.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_016513823.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_016513823.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107830702
sly-u.5
for
101244077
ath-u.5
for
AT3G26610
mtr-u.5
for
11407882
ghi-r.1
for
107902953
ghi-r.1
for
121229172
bna-r.1
for
106350894
bna-r.1
for
106409262


Ortholog ID: 12200
Species nta sly ath mtr ghi ghi bna bna
Symbol LOC107830702 LOC101244077 AT3G26610 LOC11407882 LOC107902953 LOC121229172 LOC106350894 LOC106409262
Function* polygalacturonase At1g48100-like polygalacturonase At1g48100 Pectin lyase-like superfamily protein polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100 polygalacturonase At1g48100
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi02010 ABC transporters 2
ghi04981 Folate transport and metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00770 Pantothenate and CoA biosynthesis 2
bna00966 Glucosinolate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00770 Pantothenate and CoA biosynthesis 2
bna00966 Glucosinolate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107830702 101244077 822270 11407882 107902953 121229172 106350894 106409262
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