ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107886182	ribonuclease TUDOR 1
ath-u.5	Tudor1	TUDOR-SN protein 1
ath-u.5	Tudor2	TUDOR-SN protein 2
gma-u.5	100802766	ribonuclease TUDOR 1
gma-u.5	100794481	ribonuclease TUDOR 1
gma-u.5	100809534	ribonuclease TUDOR 1
vvi-u.5	100256648	ribonuclease TUDOR 1
vvi-u.5	100244222	ribonuclease TUDOR 1
ppo-u.5	7484904	ribonuclease TUDOR 1
ppo-u.5	7456667	ribonuclease TUDOR 1
mtr-u.5	11434089	ribonuclease TUDOR 1
sly-u.5	101247307	ribonuclease TUDOR 1
sly-u.5	101247006	ribonuclease TUDOR 1
osa-u.5	4329508	ribonuclease TUDOR 1
zma-u.5	100280237	uncharacterized LOC100280237
zma-u.5	103627215	ribonuclease TUDOR 1

functional annotation

KEGG

GO BP

GO:0031047 [list] [network] regulatory ncRNA-mediated gene silencing	(146 genes)	IEA
GO:0006402 [list] [network] mRNA catabolic process	(175 genes)	IEA

GO CC

GO:0016442 [list] [network] RISC complex	(6 genes)	IEA
GO:0005829 [list] [network] cytosol	(2580 genes)	IEA
GO:0005634 [list] [network] nucleus	(7681 genes)	IEA

GO MF

GO:0004518 [list] [network] nuclease activity	(749 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3053 genes)	IEA

Protein

XP_016665527.1 [sequence] [blastp]
XP_040964626.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 2, cyto 1	(predict for XP_016665527.1)
cyto 6, nucl 3	(predict for XP_040964626.1)

Subcellular
localization
TargetP

other 4, chlo 3	(predict for XP_016665527.1)
other 5, mito 4	(predict for XP_040964626.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107886182	ath-u.5 for Tudor1	ath-u.5 for Tudor2	gma-u.5 for 100802766	gma-u.5 for 100794481	gma-u.5 for 100809534	vvi-u.5 for 100256648	vvi-u.5 for 100244222	ppo-u.5 for 7484904	ppo-u.5 for 7456667	mtr-u.5 for 11434089	sly-u.5 for 101247307	sly-u.5 for 101247006	osa-u.5 for 4329508	zma-u.5 for 100280237	zma-u.5 for 103627215

Ortholog ID: 3257

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107949621

LOC107886182

Tudor1

Tudor2

Function^*

ribonuclease TUDOR 1

TUDOR-SN protein 1

TUDOR-SN protein 2

ribonuclease TUDOR 1

ribonuclease TUDOR 2

ribonuclease TUDOR 2-like

ribonuclease TUDOR 1

staphylococcal nuclease domain-containing protein 1-like

ribonuclease TUDOR 1

uncharacterized LOC100280237

ribonuclease TUDOR 1

ribonuclease TUDOR 1-like

ribonuclease TUDOR 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03060	Protein export	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	3
bra01200	Carbon metabolism	2
bra00230	Purine metabolism	2
bra01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01230	Biosynthesis of amino acids	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	3
vvi00600	Sphingolipid metabolism	2
vvi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr04141	Protein processing in endoplasmic reticulum	3
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	12
sly04145	Phagosome	3
sly03060	Protein export	3
sly00020	Citrate cycle (TCA cycle)	2
sly00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	6
sly03040	Spliceosome	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	2
sot00020	Citrate cycle (TCA cycle)	2
sot00785	Lipoic acid metabolism	2
sot01200	Carbon metabolism	2
sot01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	4
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa03060	Protein export	3
osa04145	Phagosome	2
osa04144	Endocytosis	2
osa05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma03060	Protein export	4
zma01200	Carbon metabolism	2
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	8
zma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	4
tae04141	Protein processing in endoplasmic reticulum	4
tae03015	mRNA surveillance pathway	3
tae00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	7
tae03060	Protein export	4
tae03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04142	Lysosome	2
hvu05100	Bacterial invasion of epithelial cells	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4
sbi04142	Lysosome	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	7
bdi03060	Protein export	4
bdi04142	Lysosome	3
bdi04145	Phagosome	3
bdi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	6
bdi03060	Protein export	4
bdi00510	N-Glycan biosynthesis	3
bdi00513	Various types of N-glycan biosynthesis	3
bdi04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	5
cre03060	Protein export	3
cre04145	Phagosome	3

Expression

Expression pattern

Entrez Gene ID^*

107949621

107886182

830626

836300

103855724

103854960

125581579

106383395

102617109

100809534

100782692

100256648

100244222

7456667

7484904

11434089

101247006

101247307

102600425

107815454

107822682

4329508

100280237

103627215

123090730

123087230

123447219

8056813

100843582

100832402

5722882

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107886182 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886182 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	3	2	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107886182 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886182 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**