ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107886779	uncharacterized LOC107886779
ghi-r.1	107928820	uncharacterized LOC107928820
ghi-r.1	107909286	uncharacterized LOC107909286
ghi-r.1	107942190	uncharacterized LOC107942190
ath-u.5	AT4G28330	pyrroline-5-carboxylate reductase
bra-r.6	103843690	uncharacterized LOC103843690
bra-r.6	103834766	uncharacterized LOC103834766
bra-r.6	103868047	uncharacterized LOC103868047
bna-r.1	106409221	uncharacterized LOC106409221
bna-r.1	BNAC08G45520D	uncharacterized BNAC08G45520D
cit-r.1	102625436	hypothetical protein
gma-u.5	100820371	uncharacterized LOC100820371
gma-u.5	100811991	uncharacterized LOC100811991
gma-u.5	100805467	uncharacterized LOC100805467
vvi-u.5	100260881	uncharacterized LOC100260881
ppo-u.5	18104623	uncharacterized LOC18104623
mtr-u.5	11438172	uncharacterized LOC11438172
sly-u.5	101264375	uncharacterized LOC101264375
sly-u.5	101245074	uncharacterized LOC101245074
sot-r.1	102593172	uncharacterized LOC102593172
sot-r.1	107059130	uncharacterized LOC107059130
nta-r.1	107792184	uncharacterized LOC107792184
nta-r.1	107797559	uncharacterized LOC107797559
zma-u.5	100274766	uncharacterized LOC100274766
zma-u.5	100278518	uncharacterized LOC100278518
hvu-r.1	123398737	uncharacterized LOC123398737
sbi-r.1	8070358	uncharacterized LOC8070358
bdi-r.1	100835381	uncharacterized LOC100835381

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016666328.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, plas 1

(predict for XP_016666328.1)

Subcellular
localization
TargetP

chlo 6, other 6

(predict for XP_016666328.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107886779	ghi-r.1 for 107928820	ghi-r.1 for 107909286	ghi-r.1 for 107942190	ath-u.5 for AT4G28330	bra-r.6 for 103843690	bra-r.6 for 103834766	bra-r.6 for 103868047	bna-r.1 for 106409221	bna-r.1 for BNAC08G45520D	cit-r.1 for 102625436	gma-u.5 for 100820371	gma-u.5 for 100811991	gma-u.5 for 100805467	vvi-u.5 for 100260881	ppo-u.5 for 18104623	mtr-u.5 for 11438172	sly-u.5 for 101264375	sly-u.5 for 101245074	sot-r.1 for 102593172	sot-r.1 for 107059130	nta-r.1 for 107792184	nta-r.1 for 107797559	zma-u.5 for 100274766	zma-u.5 for 100278518	hvu-r.1 for 123398737	sbi-r.1 for 8070358	bdi-r.1 for 100835381

Ortholog

Ortholog ID: 5134

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

zma

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107886779

uncharacterized LOC107909286

uncharacterized LOC107942190

pyrroline-5-carboxylate reductase

uncharacterized LOC103843690

uncharacterized LOC103834766

uncharacterized LOC103868047

uncharacterized LOC106409221

uncharacterized BNAC01G20860D

hypothetical protein

uncharacterized LOC100820371

uncharacterized LOC100811991

uncharacterized LOC100805467

uncharacterized LOC100260881

uncharacterized LOC18104623

uncharacterized LOC11438172

uncharacterized LOC101264375

uncharacterized LOC101245074

uncharacterized LOC102593172

uncharacterized LOC107059130

uncharacterized LOC107792184

uncharacterized LOC107797559

uncharacterized LOC100274766

uncharacterized LOC100278518

uncharacterized LOC123398737

uncharacterized LOC8070358

uncharacterized LOC100835381

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00195	Photosynthesis	8
ghi00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00960	Tropane, piperidine and pyridine alkaloid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3
vvi04144	Endocytosis	2
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	3
ppo03272	Virion - Hepatitis viruses	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00051	Fructose and mannose metabolism	2
hvu00541	Biosynthesis of various nucleotide sugars	2
hvu01250	Biosynthesis of nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

107886779

107909286

107942190

828948

103843690

103834766

103868047

106409221

106374502

102625436

100820371

100811991

100805467

100260881

18104623

11438172

101264375

101245074

102593172

107059130

107792184

107797559

100274766

100278518

123398737

8070358

100835381

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107886779 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886779 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	zma	hvu	sbi	bdi	osa	tae	cre
Paralog	4	1	3	2	1	3	1	1	1	2	2	2	2	1	1	1	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107886779 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886779 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**