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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107886780  probable serine/threonine-protein kinase At1g54610 
 ghi-r.1  107898964  probable serine/threonine-protein kinase At1g54610 
 ghi-r.1  107909284  probable serine/threonine-protein kinase At1g54610 
 ghi-r.1  107943755  probable serine/threonine-protein kinase At1g54610 
 cit-r.1  102626385  probable serine/threonine-protein kinase At1g54610 
 ppo-u.5  18104620  probable serine/threonine-protein kinase At1g54610 

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Top 50 coexpressed genes to 107886780 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886780 (ghi-r.1 coexpression data)

CoexMap"107886780"


ghiLOC107886780 | Entrez gene ID : 107886780
Species ghi cit ppo vvi bdi bna sbi gma hvu sot sly nta osa tae zma cre mtr ath bra
Paralog 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II  (55 genes)  IEA  
GO:0006468 [list] [network] protein phosphorylation  (3020 genes)  IEA  
GO CC
GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex  (198 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity  (48 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016666329.2 [sequence] [blastp]
XP_016666330.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016666329.2)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  cysk 1,  chlo_mito 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016666330.2)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_016666329.2)
other 5,  chlo 4  (predict for XP_016666330.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107886780


ghi-r.1
for
107898964


ghi-r.1
for
107909284


ghi-r.1
for
107943755


cit-r.1
for
102626385


ppo-u.5
for
18104620



Ortholog ID: 19888
Species ghi ghi ghi cit ppo
Symbol LOC107898964 LOC107909284 LOC107943755 LOC102626385 LOC18104620
Function* probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610 probable serine/threonine-protein kinase At1g54610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107898964 107909284 107943755 102626385 18104620
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