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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107887008   MADS-box protein SVP 
 ghi-r.1   107908929   MADS-box protein AGL24-like 
 ghi-r.1   107918801   MADS-box protein SVP-like 
 ghi-r.1   121212251   MADS-box protein SVP 
 sly-u.5   101266766   MADS-box protein SVP 
 sot-r.1   STMADS11   MADS transcriptional factor 
 nta-r.1   107787838   MADS-box protein JOINTLESS 
 nta-r.1   107830515   MADS-box protein SVP-like 

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Top 50 coexpressed genes to 107887008 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107887008 (ghi-r.1 coexpression data)

CoexMap"107887008"


ghiLOC107887008 | Entrez gene ID : 107887008    
Species ghi sly sot nta hvu vvi bdi osa tae bna ppo zma cre mtr sbi gma bra ath cit
Paralog 4 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (349 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (729 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016666624.1 [sequence] [blastp]
XP_016666626.1 [sequence] [blastp]
XP_040957804.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016666624.1)
nucl 8,  chlo 1,  mito 1,  golg 1,  chlo_mito 1  (predict for XP_016666626.1)
nucl 7,  chlo 1,  mito 1,  plas 1,  mito_plas 1  (predict for XP_040957804.1)
Subcellular
localization
TargetP
mito 8,  other 6  (predict for XP_016666624.1)
other 7,  mito 3  (predict for XP_016666626.1)
mito 8,  other 6  (predict for XP_040957804.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107887008
ghi-r.1
for
107908929
ghi-r.1
for
107918801
ghi-r.1
for
121212251
sly-u.5
for
101266766
sot-r.1
for
STMADS11
nta-r.1
for
107787838
nta-r.1
for
107830515


Ortholog ID: 17714
Species ghi ghi ghi sly sot nta nta
Symbol LOC107887008 LOC107908929 LOC121212251 LOC101266766 STMADS11 LOC107787838 LOC107830515
Function* MADS-box protein SVP MADS-box protein AGL24-like MADS-box protein SVP MADS-box protein SVP MADS transcriptional factor MADS-box protein JOINTLESS MADS-box protein SVP-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
ghi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00062 Fatty acid elongation 2
sly04626 Plant-pathogen interaction 2
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107887008 107908929 121212251 101266766 102577664 107787838 107830515
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