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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107887328   RING-H2 finger protein ATL68 
 ghi-r.1   107900921   RING-H2 finger protein ATL68 
 ghi-r.1   121209728   RING-H2 finger protein ATL67 
 ghi-r.1   107955263   RING-H2 finger protein ATL67 
 ath-u.5   AT2G46160   RING/U-box superfamily protein 
 ath-u.5   AT3G61550   RING/U-box superfamily protein 
 bra-r.6   103866496   RING-H2 finger protein ATL67 
 bra-r.6   103866269   RING-H2 finger protein ATL67 
 bra-r.6   103841977   RING-H2 finger protein ATL68 
 bna-r.1   106454538   RING-H2 finger protein ATL67 
 bna-r.1   106365098   RING-H2 finger protein ATL68-like 
 cit-r.1   127901154   RING-H2 finger protein ATL67-like 
 cit-r.1   102624556   hypothetical protein 
 gma-u.5   100793332   RING-H2 finger protein ATL67 
 gma-u.5   100778633   RING-H2 finger protein ATL67 
 ppo-u.5   7457365   RING-H2 finger protein ATL68 
 ppo-u.5   7492736   RING-H2 finger protein ATL67 
 mtr-u.5   25500809   RING-H2 finger protein ATL67 
 sly-u.5   104649382   RING-H2 finger protein ATL67-like 
 sly-u.5   101258788   RING-H2 finger protein ATL67 
 sot-r.1   102587647   RING-H2 finger protein ATL67-like 
 sot-r.1   102597133   RING-H2 finger protein ATL67-like 
 osa-u.5   4339384   RING-H2 finger protein ATL67 
 sbi-r.1   8062151   RING-H2 finger protein ATL67 
 bdi-r.1   100845487   RING-H2 finger protein ATL67-like 
 bdi-r.1   100841321   RING-H2 finger protein ATL67-like 

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Top 50 coexpressed genes to 107887328 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107887328 (ghi-r.1 coexpression data)

CoexMap"107887328"


ghiLOC107887328 | Entrez gene ID : 107887328    
Species ghi ath bra bna cit gma ppo mtr sly sot osa sbi bdi zma cre nta tae hvu vvi
Paralog 4 2 3 2 2 2 2 1 2 2 1 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0016740 [list] [network] transferase activity  (8317 genes)  IEA  
Protein XP_016667009.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016667009.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_016667009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107887328
ghi-r.1
for
107900921
ghi-r.1
for
121209728
ghi-r.1
for
107955263
ath-u.5
for
AT2G46160
ath-u.5
for
AT3G61550
bra-r.6
for
103866496
bra-r.6
for
103866269
bra-r.6
for
103841977
bna-r.1
for
106454538
bna-r.1
for
106365098
cit-r.1
for
127901154
cit-r.1
for
102624556
gma-u.5
for
100793332
gma-u.5
for
100778633
ppo-u.5
for
7457365
ppo-u.5
for
7492736
mtr-u.5
for
25500809
sly-u.5
for
104649382
sly-u.5
for
101258788
sot-r.1
for
102587647
sot-r.1
for
102597133
osa-u.5
for
4339384
sbi-r.1
for
8062151
bdi-r.1
for
100845487
bdi-r.1
for
100841321


Ortholog ID: 2330
Species ghi ghi ghi ath ath bra bra bra bna bna cit cit gma gma ppo ppo mtr sly sly sot sot osa zma tae sbi bdi bdi
Symbol LOC107955263 LOC107954516 LOC107911495 AT2G46160 AT3G61550 LOC103866496 LOC103866269 LOC103841977 LOC106454538 LOC106450704 LOC127901154 LOC102624556 LOC100778633 LOC112997685 LOC7457365 LOC7492736 LOC25500809 LOC104649382 LOC101258788 LOC102587647 LOC102597133 LOC4339384 LOC100280861 LOC123141152 LOC8062151 LOC100845487 LOC100841321
Function* RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL68 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67-like hypothetical protein RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL68 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67-like RING-H2 finger protein ATL67 RING-H2 finger protein ATL67-like RING-H2 finger protein ATL67-like RING-H2 finger protein ATL67 RING-H2 finger protein ATL2M RING-H2 finger protein ATL67 RING-H2 finger protein ATL67 RING-H2 finger protein ATL67-like RING-H2 finger protein ATL67-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 3
ath04626 Plant-pathogen interaction 2
ath04981 Folate transport and metabolism 2
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath00062 Fatty acid elongation 3
ath04626 Plant-pathogen interaction 3
ath04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00670 One carbon pool by folate 4
sly01230 Biosynthesis of amino acids 4
sly01240 Biosynthesis of cofactors 3
sly00270 Cysteine and methionine metabolism 3
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107955263 107954516 107911495 819223 825328 103866496 103866269 103841977 106454538 106450704 127901154 102624556 100778633 112997685 7457365 7492736 25500809 104649382 101258788 102587647 102597133 4339384 100280861 123141152 8062151 100845487 100841321
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